RNA–Protein interactions for RNA: ENSMUST00000099673.8

Cd44-203, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 2,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-203ENSMUST00000099673 Krtap20-2E9Q0A8 60 aa2.28□□□□□ -2.04
Cd44-203ENSMUST00000099673 Gm45618A0A1B0GSA0 219 aa2.27□□□□□ -2.05
Cd44-203ENSMUST00000099673 2310046K23RikA0A0A6YVW6 87 aa2.26□□□□□ -2.05
Cd44-203ENSMUST00000099673 Krtap19-9bQ99NG9 58 aa2.25□□□□□ -2.05
Cd44-203ENSMUST00000099673 Gm11569B1AQB1 180 aa2.24□□□□□ -2.05
Cd44-203ENSMUST00000099673 Lce1a1Q9CQH5 143 aa2.23□□□□□ -2.05
Cd44-203ENSMUST00000099673 Krtap9-3Q3V2C1 136 aa2.21□□□□□ -2.06
Cd44-203ENSMUST00000099673 Gm10061D3Z714 54 aa2.19□□□□□ -2.06
Cd44-203ENSMUST00000099673 2300003K06RikA2A4M0 262 aa2.18□□□□□ -2.06
Cd44-203ENSMUST00000099673 Gm6358A0A087WPH4 74 aa2.16□□□□□ -2.06
Cd44-203ENSMUST00000099673 Mt2P02798 61 aa2.15□□□□□ -2.07
Cd44-203ENSMUST00000099673 Gm39115A0A1B0GSH7 232 aa2.1□□□□□ -2.07
Cd44-203ENSMUST00000099673 Gm11595B1AQA7 289 aa2.09□□□□□ -2.08
Cd44-203ENSMUST00000099673 Krtap4-8B1AQA8 209 aa2.09□□□□□ -2.08
Cd44-203ENSMUST00000099673 Gm10100J3QK64 120 aa2.08□□□□□ -2.08
Cd44-203ENSMUST00000099673 Lce1lQ9D1G7 135 aa2.06□□□□□ -2.08
Cd44-203ENSMUST00000099673 Mdn1A2ANY6 5589 aaKnown RBP2.05□□□□□ -2.08
Cd44-203ENSMUST00000099673 Krtap4-6Q3V4B7 195 aa2.04□□□□□ -2.08
Cd44-203ENSMUST00000099673 Krtap4-9B1AQA9 244 aa2.02□□□□□ -2.09
Cd44-203ENSMUST00000099673 4933428G20RikQ9D3X4 101 aa2.02□□□□□ -2.09
Cd44-203ENSMUST00000099673 Krtap22-2J3QNX6 67 aa2□□□□□ -2.09
Cd44-203ENSMUST00000099673 Sprr2gO70558 76 aa2□□□□□ -2.09
Cd44-203ENSMUST00000099673 Sprr2dO70555 85 aa1.99□□□□□ -2.09
Cd44-203ENSMUST00000099673 Gm10272F7CZ33 110 aa1.97□□□□□ -2.09
Cd44-203ENSMUST00000099673 Gm11938Q9D3H4 131 aa1.94□□□□□ -2.1
Cd44-203ENSMUST00000099673 Gm11554B1AQB2 190 aa1.93□□□□□ -2.1
Cd44-203ENSMUST00000099673 Kmt2dQ6PDK2 5588 aa1.91□□□□□ -2.1
Cd44-203ENSMUST00000099673 Gm10142J3KMP7 120 aa1.89□□□□□ -2.11
Cd44-203ENSMUST00000099673 Gm29735A0A1B0GT06 219 aa1.89□□□□□ -2.11
Cd44-203ENSMUST00000099673 Lce1cQ9D1C5 147 aa1.88□□□□□ -2.11
Cd44-203ENSMUST00000099673 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Cd44-203ENSMUST00000099673 Krtap19-4Q925H7 84 aa1.86□□□□□ -2.11
Cd44-203ENSMUST00000099673 Syne1Q6ZWR6 8799 aa1.86□□□□□ -2.11
Cd44-203ENSMUST00000099673 Fsip2A2ARZ3 6995 aa1.85□□□□□ -2.11
Cd44-203ENSMUST00000099673 Krtap4-13Q9D7P3 165 aa1.81□□□□□ -2.12
Cd44-203ENSMUST00000099673 Lce1fB9EJP6 147 aa1.81□□□□□ -2.12
Cd44-203ENSMUST00000099673 Krtap4-16Q91W93 202 aa1.79□□□□□ -2.12
Cd44-203ENSMUST00000099673 Lce3bQ9CQM7 98 aa1.79□□□□□ -2.12
Cd44-203ENSMUST00000099673 Gm2431E9Q8S1 172 aa1.77□□□□□ -2.13
Cd44-203ENSMUST00000099673 Sprr2kO70562 68 aa1.77□□□□□ -2.13
Cd44-203ENSMUST00000099673 Mt4P47945 62 aa1.76□□□□□ -2.13
Cd44-203ENSMUST00000099673 Krtap5-1Q64507 230 aa1.76□□□□□ -2.13
Cd44-203ENSMUST00000099673 Sprr2iO70560 76 aa1.74□□□□□ -2.13
Cd44-203ENSMUST00000099673 Krtap9-1Q64526 186 aa1.73□□□□□ -2.13
Cd44-203ENSMUST00000099673 Sprr2hO70559 108 aa1.71□□□□□ -2.14
Cd44-203ENSMUST00000099673 Lce3cQ91V05 98 aa1.71□□□□□ -2.14
Cd44-203ENSMUST00000099673 Sprr2eO70556 76 aa1.7□□□□□ -2.14
Cd44-203ENSMUST00000099673 Lce3eF8VQJ0 98 aa1.7□□□□□ -2.14
Cd44-203ENSMUST00000099673 Lce3fQ6PAI4 98 aa1.7□□□□□ -2.14
Cd44-203ENSMUST00000099673 ObscnA2AAJ9 8891 aaKnown RBP1.69□□□□□ -2.14
Cd44-203ENSMUST00000099673 Lce3dE9Q8V1 98 aa1.69□□□□□ -2.14
Cd44-203ENSMUST00000099673 Gm45337A0A1B0GS71 263 aa1.68□□□□□ -2.14
Cd44-203ENSMUST00000099673 Lce1kJ3QP15 125 aa1.66□□□□□ -2.14
Cd44-203ENSMUST00000099673 Sprr2fO70557 76 aa1.66□□□□□ -2.14
Cd44-203ENSMUST00000099673 Gm4553A0A1B0GSA9 284 aa1.66□□□□□ -2.14
Cd44-203ENSMUST00000099673 AhnakE9Q616 5656 aaKnown RBP1.65□□□□□ -2.15
Cd44-203ENSMUST00000099673 Gm4559A4IF42 199 aa1.63□□□□□ -2.15
Cd44-203ENSMUST00000099673 Lce3aQ497I5 98 aa1.63□□□□□ -2.15
Cd44-203ENSMUST00000099673 Mt3P28184 68 aa1.62□□□□□ -2.15
Cd44-203ENSMUST00000099673 Mt1P02802 61 aaKnown RBP1.62□□□□□ -2.15
Cd44-203ENSMUST00000099673 Gm7579A0A1B0GRJ4 243 aa1.57□□□□□ -2.16
Cd44-203ENSMUST00000099673 Gm11568A2A4M2 211 aa1.57□□□□□ -2.16
Cd44-203ENSMUST00000099673 Krtap5-5Q2TA51 241 aa1.57□□□□□ -2.16
Cd44-203ENSMUST00000099673 Krtap5-2Q9D5Z7 189 aa1.57□□□□□ -2.16
Cd44-203ENSMUST00000099673 Krtap5-4Q62220 223 aa1.57□□□□□ -2.16
Cd44-203ENSMUST00000099673 Macf1Q9QXZ0 7354 aaKnown RBP1.56□□□□□ -2.16
Cd44-203ENSMUST00000099673 DstQ91ZU6 7393 aaKnown RBP1.56□□□□□ -2.16
Cd44-203ENSMUST00000099673 Gm10153A0A1B0GRL1 320 aa1.55□□□□□ -2.16
Cd44-203ENSMUST00000099673 NebE9Q1W3 7152 aa1.49□□□□□ -2.17
Cd44-203ENSMUST00000099673 Muc16A0A140LJ72 8478 aa1.46□□□□□ -2.18
Cd44-203ENSMUST00000099673 Gm40460A0A1B0GR10 244 aa1.44□□□□□ -2.18
Cd44-203ENSMUST00000099673 Gm10024A0A0A0MQA4 119 aa1.44□□□□□ -2.18
Cd44-203ENSMUST00000099673 Muc19Q6PZE0 7524 aa1.41□□□□□ -2.18
Cd44-203ENSMUST00000099673 1110025L11RikO09048 78 aa1.25□□□□□ -2.21
Cd44-203ENSMUST00000099673 Krtap6-5Q925H3 78 aa1.25□□□□□ -2.21
Cd44-203ENSMUST00000099673 Sprr2bO70554 98 aa1.23□□□□□ -2.21
Cd44-203ENSMUST00000099673 Gm10229O08631 77 aa1.09□□□□□ -2.23
Cd44-203ENSMUST00000099673 Krtap21-1Q925H4 128 aa1.04□□□□□ -2.24
Cd44-203ENSMUST00000099673 Phgr1Q8K0G7 91 aa1.01□□□□□ -2.25
Cd44-203ENSMUST00000099673 Krtap6-2O08884 159 aa0.92□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 98.3 ms