RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Fat4Q2PZL6 4981 aa4.74□□□□□ -1.65
Col17a1-202ENSMUST00000086923 Ush2AQ2QI47 5193 aa4.72□□□□□ -1.65
Col17a1-202ENSMUST00000086923 ZanO88799 5376 aa4.71□□□□□ -1.66
Col17a1-202ENSMUST00000086923 Mt4P47945 62 aa4.67□□□□□ -1.66
Col17a1-202ENSMUST00000086923 Gm11562A0PK51 136 aa4.63□□□□□ -1.67
Col17a1-202ENSMUST00000086923 Hmcn2A2AJ76 5100 aa4.6□□□□□ -1.67
Col17a1-202ENSMUST00000086923 Krtap4-6Q3V4B7 195 aa4.57□□□□□ -1.68
Col17a1-202ENSMUST00000086923 Muc16A0A140LJ72 8478 aa4.57□□□□□ -1.68
Col17a1-202ENSMUST00000086923 Rnf213E9Q555 5152 aaKnown RBP4.56□□□□□ -1.68
Col17a1-202ENSMUST00000086923 Krtap17-1A2A5X6 109 aa4.54□□□□□ -1.68
Col17a1-202ENSMUST00000086923 Gm11596B1AQB0 205 aa4.44□□□□□ -1.7
Col17a1-202ENSMUST00000086923 Krtap4-1Q3UUY3 169 aa4.42□□□□□ -1.7
Col17a1-202ENSMUST00000086923 Lce1a1Q9CQH5 143 aa4.42□□□□□ -1.7
Col17a1-202ENSMUST00000086923 Gm11564A2A4L9 201 aa4.36□□□□□ -1.71
Col17a1-202ENSMUST00000086923 Gm11563B1AQ90 168 aa4.36□□□□□ -1.71
Col17a1-202ENSMUST00000086923 Gm11595B1AQA7 289 aa4.36□□□□□ -1.71
Col17a1-202ENSMUST00000086923 Krtap4-8B1AQA8 209 aa4.36□□□□□ -1.71
Col17a1-202ENSMUST00000086923 2300003K06RikA2A4M0 262 aa4.32□□□□□ -1.72
Col17a1-202ENSMUST00000086923 Krtap4-7Q9D732 168 aa4.31□□□□□ -1.72
Col17a1-202ENSMUST00000086923 Muc5bE9Q5I3 4800 aa4.29□□□□□ -1.72
Col17a1-202ENSMUST00000086923 Krtap4-9B1AQA9 244 aa4.28□□□□□ -1.72
Col17a1-202ENSMUST00000086923 Mt3P28184 68 aa4.27□□□□□ -1.73
Col17a1-202ENSMUST00000086923 Fsip2A2ARZ3 6995 aa4.2□□□□□ -1.74
Col17a1-202ENSMUST00000086923 ObscnA2AAJ9 8891 aaKnown RBP4.17□□□□□ -1.74
Col17a1-202ENSMUST00000086923 Lce1kJ3QP15 125 aa4.15□□□□□ -1.74
Col17a1-202ENSMUST00000086923 Krtap4-13Q9D7P3 165 aa4.14□□□□□ -1.75
Col17a1-202ENSMUST00000086923 Krtap6-3A0A087WQL6 57 aa4.14□□□□□ -1.75
Col17a1-202ENSMUST00000086923 SspoQ8CG65 4998 aa4.12□□□□□ -1.75
Col17a1-202ENSMUST00000086923 Syne2Q6ZWQ0 6874 aaKnown RBP4.09□□□□□ -1.76
Col17a1-202ENSMUST00000086923 Mt1P02802 61 aaKnown RBP4.06□□□□□ -1.76
Col17a1-202ENSMUST00000086923 Sprr2bO70554 98 aa3.87□□□□□ -1.79
Col17a1-202ENSMUST00000086923 Eppk1Q8R0W0 6548 aa3.82□□□□□ -1.8
Col17a1-202ENSMUST00000086923 Gm11554B1AQB2 190 aa3.71□□□□□ -1.82
Col17a1-202ENSMUST00000086923 Gm11555B1AQ89 175 aa3.62□□□□□ -1.83
Col17a1-202ENSMUST00000086923 Krtap20-2E9Q0A8 60 aa3.61□□□□□ -1.83
Col17a1-202ENSMUST00000086923 Macf1Q9QXZ0 7354 aaKnown RBP3.54□□□□□ -1.84
Col17a1-202ENSMUST00000086923 1110025L11RikO09048 78 aa3.3□□□□□ -1.88
Col17a1-202ENSMUST00000086923 Krtap6-5Q925H3 78 aa3.3□□□□□ -1.88
Col17a1-202ENSMUST00000086923 Phgr1Q8K0G7 91 aa3.26□□□□□ -1.89
Col17a1-202ENSMUST00000086923 Kmt2dQ6PDK2 5588 aa3.23□□□□□ -1.89
Col17a1-202ENSMUST00000086923 Muc19Q6PZE0 7524 aa3.21□□□□□ -1.89
Col17a1-202ENSMUST00000086923 DstQ91ZU6 7393 aaKnown RBP3.2□□□□□ -1.9
Col17a1-202ENSMUST00000086923 NebE9Q1W3 7152 aa3.17□□□□□ -1.9
Col17a1-202ENSMUST00000086923 Gm11568A2A4M2 211 aa3.12□□□□□ -1.91
Col17a1-202ENSMUST00000086923 Gm10229O08631 77 aa3.09□□□□□ -1.91
Col17a1-202ENSMUST00000086923 Gm11559Q9D3H7 191 aa3.05□□□□□ -1.92
Col17a1-202ENSMUST00000086923 Krtap9-1Q64526 186 aa3.04□□□□□ -1.92
Col17a1-202ENSMUST00000086923 Gm11567Q9D141 195 aa2.92□□□□□ -1.94
Col17a1-202ENSMUST00000086923 Gm11639A0A1D5RLM8 5808 aa2.82□□□□□ -1.96
Col17a1-202ENSMUST00000086923 Krtap5-2Q9D5Z7 189 aa2.81□□□□□ -1.96
Col17a1-202ENSMUST00000086923 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Col17a1-202ENSMUST00000086923 Hmcn1D3YXG0 5634 aa2.72□□□□□ -1.97
Col17a1-202ENSMUST00000086923 Gm4553A0A1B0GSA9 284 aa2.63□□□□□ -1.99
Col17a1-202ENSMUST00000086923 Gm2431E9Q8S1 172 aa2.53□□□□□ -2
Col17a1-202ENSMUST00000086923 Gm10153A0A1B0GRL1 320 aa2.48□□□□□ -2.01
Col17a1-202ENSMUST00000086923 A0A1Y7VJH8 109 aa2.48□□□□□ -2.01
Col17a1-202ENSMUST00000086923 Krtap6-2O08884 159 aa2.42□□□□□ -2.02
Col17a1-202ENSMUST00000086923 A030005L19RikA0A1Y7VIU2 113 aa2.41□□□□□ -2.02
Col17a1-202ENSMUST00000086923 AhnakE9Q616 5656 aaKnown RBP2.39□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Gm45337A0A1B0GS71 263 aa2.38□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Krtap21-1Q925H4 128 aa2.35□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Gm40460A0A1B0GR10 244 aa2.35□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Gm7579A0A1B0GRJ4 243 aa2.35□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Krtap5-5Q2TA51 241 aa2.35□□□□□ -2.03
Col17a1-202ENSMUST00000086923 Krtap5-4Q62220 223 aa2.35□□□□□ -2.03
Col17a1-202ENSMUST00000086923 A0A1Y7VLE6 161 aa2.23□□□□□ -2.05
Col17a1-202ENSMUST00000086923 Gm39115A0A1B0GSH7 232 aa2.17□□□□□ -2.06
Col17a1-202ENSMUST00000086923 Gm45618A0A1B0GSA0 219 aa1.86□□□□□ -2.11
Col17a1-202ENSMUST00000086923 Gm29735A0A1B0GT06 219 aa1.8□□□□□ -2.12
Col17a1-202ENSMUST00000086923 A030003K21RikA0A1Y7VIM3 128 aa1.78□□□□□ -2.12
Col17a1-202ENSMUST00000086923 Gm6217A0A1Y7VJK9 128 aa1.69□□□□□ -2.14
Col17a1-202ENSMUST00000086923 A0A1Y7VJ07 166 aa1.67□□□□□ -2.14
Col17a1-202ENSMUST00000086923 Krtap28-10A0A1Y7VP58 119 aa1.51□□□□□ -2.17
Col17a1-202ENSMUST00000086923 A030005K14RikA0A1Y7VNY1 122 aa1.41□□□□□ -2.18
Col17a1-202ENSMUST00000086923 A0A286YCP9 139 aa1.4□□□□□ -2.19
Col17a1-202ENSMUST00000086923 Krtap28-13A0A087WQP5 138 aa1.38□□□□□ -2.19
Col17a1-202ENSMUST00000086923 Krtap5-1Q64507 230 aa1.34□□□□□ -2.2
Col17a1-202ENSMUST00000086923 Gm7544A0A1Y7VJ58 118 aa1.3□□□□□ -2.2
Col17a1-202ENSMUST00000086923 A030014E15RikA0A1Y7VJV2 120 aa1.19□□□□□ -2.22
Col17a1-202ENSMUST00000086923 Gm4559A4IF42 199 aa0.98□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 53 ms