RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Rnf213E9Q555 5152 aaKnown RBP2.38□□□□□ -2.03
Spen-201ENSMUST00000078886 Gm11569B1AQB1 180 aa2.38□□□□□ -2.03
Spen-201ENSMUST00000078886 Krtap17-1A2A5X6 109 aa2.38□□□□□ -2.03
Spen-201ENSMUST00000078886 Lce1a2Q9D1K4 149 aa2.37□□□□□ -2.03
Spen-201ENSMUST00000078886 Hmcn2A2AJ76 5100 aa2.36□□□□□ -2.03
Spen-201ENSMUST00000078886 Gm11938Q9D3H4 131 aa2.35□□□□□ -2.03
Spen-201ENSMUST00000078886 Lce1kJ3QP15 125 aa2.34□□□□□ -2.03
Spen-201ENSMUST00000078886 Fat4Q2PZL6 4981 aa2.34□□□□□ -2.03
Spen-201ENSMUST00000078886 Mt4P47945 62 aa2.34□□□□□ -2.04
Spen-201ENSMUST00000078886 Gm11562A0PK51 136 aa2.32□□□□□ -2.04
Spen-201ENSMUST00000078886 ObscnA2AAJ9 8891 aaKnown RBP2.27□□□□□ -2.05
Spen-201ENSMUST00000078886 Lce1a1Q9CQH5 143 aa2.25□□□□□ -2.05
Spen-201ENSMUST00000078886 Krtap4-6Q3V4B7 195 aa2.24□□□□□ -2.05
Spen-201ENSMUST00000078886 Mt3P28184 68 aa2.21□□□□□ -2.06
Spen-201ENSMUST00000078886 Ush2AQ2QI47 5193 aa2.21□□□□□ -2.06
Spen-201ENSMUST00000078886 Eppk1Q8R0W0 6548 aa2.2□□□□□ -2.06
Spen-201ENSMUST00000078886 Krtap4-2B1AQ85 167 aa2.2□□□□□ -2.06
Spen-201ENSMUST00000078886 Sprr2bO70554 98 aa2.19□□□□□ -2.06
Spen-201ENSMUST00000078886 SspoQ8CG65 4998 aa2.16□□□□□ -2.06
Spen-201ENSMUST00000078886 2300003K06RikA2A4M0 262 aa2.15□□□□□ -2.06
Spen-201ENSMUST00000078886 Krtap4-7Q9D732 168 aa2.13□□□□□ -2.07
Spen-201ENSMUST00000078886 Krtap4-1Q3UUY3 169 aa2.12□□□□□ -2.07
Spen-201ENSMUST00000078886 Muc16A0A140LJ72 8478 aa2.11□□□□□ -2.07
Spen-201ENSMUST00000078886 Krtap4-9B1AQA9 244 aa2.1□□□□□ -2.07
Spen-201ENSMUST00000078886 Gm11564A2A4L9 201 aa2.1□□□□□ -2.07
Spen-201ENSMUST00000078886 Gm11563B1AQ90 168 aa2.1□□□□□ -2.07
Spen-201ENSMUST00000078886 Gm11595B1AQA7 289 aa2.1□□□□□ -2.07
Spen-201ENSMUST00000078886 Krtap4-8B1AQA8 209 aa2.1□□□□□ -2.07
Spen-201ENSMUST00000078886 Gm11596B1AQB0 205 aa2.07□□□□□ -2.08
Spen-201ENSMUST00000078886 Mt1P02802 61 aaKnown RBP2.07□□□□□ -2.08
Spen-201ENSMUST00000078886 DstQ91ZU6 7393 aaKnown RBP2.06□□□□□ -2.08
Spen-201ENSMUST00000078886 Macf1Q9QXZ0 7354 aaKnown RBP2.06□□□□□ -2.08
Spen-201ENSMUST00000078886 Krtap4-13Q9D7P3 165 aa2.05□□□□□ -2.08
Spen-201ENSMUST00000078886 Kmt2dQ6PDK2 5588 aa2.03□□□□□ -2.08
Spen-201ENSMUST00000078886 A0A1Y7VLE6 161 aa1.97□□□□□ -2.09
Spen-201ENSMUST00000078886 NebE9Q1W3 7152 aa1.92□□□□□ -2.1
Spen-201ENSMUST00000078886 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Spen-201ENSMUST00000078886 Krtap6-3A0A087WQL6 57 aa1.88□□□□□ -2.11
Spen-201ENSMUST00000078886 Muc19Q6PZE0 7524 aa1.86□□□□□ -2.11
Spen-201ENSMUST00000078886 Gm11554B1AQB2 190 aa1.86□□□□□ -2.11
Spen-201ENSMUST00000078886 A030003K21RikA0A1Y7VIM3 128 aa1.83□□□□□ -2.12
Spen-201ENSMUST00000078886 Krtap20-2E9Q0A8 60 aa1.8□□□□□ -2.12
Spen-201ENSMUST00000078886 A0A1Y7VJ07 166 aa1.8□□□□□ -2.12
Spen-201ENSMUST00000078886 Krtap28-13A0A087WQP5 138 aa1.76□□□□□ -2.13
Spen-201ENSMUST00000078886 A030005K14RikA0A1Y7VNY1 122 aa1.75□□□□□ -2.13
Spen-201ENSMUST00000078886 Gm11639A0A1D5RLM8 5808 aa1.75□□□□□ -2.13
Spen-201ENSMUST00000078886 A030014E15RikA0A1Y7VJV2 120 aa1.75□□□□□ -2.13
Spen-201ENSMUST00000078886 Krtap28-10A0A1Y7VP58 119 aa1.75□□□□□ -2.13
Spen-201ENSMUST00000078886 Gm6217A0A1Y7VJK9 128 aa1.72□□□□□ -2.13
Spen-201ENSMUST00000078886 Gm7544A0A1Y7VJ58 118 aa1.67□□□□□ -2.14
Spen-201ENSMUST00000078886 A0A1Y7VJH8 109 aa1.67□□□□□ -2.14
Spen-201ENSMUST00000078886 1110025L11RikO09048 78 aa1.67□□□□□ -2.14
Spen-201ENSMUST00000078886 Krtap6-5Q925H3 78 aa1.67□□□□□ -2.14
Spen-201ENSMUST00000078886 Gm11568A2A4M2 211 aa1.66□□□□□ -2.14
Spen-201ENSMUST00000078886 Hmcn1D3YXG0 5634 aa1.65□□□□□ -2.15
Spen-201ENSMUST00000078886 Phgr1Q8K0G7 91 aa1.63□□□□□ -2.15
Spen-201ENSMUST00000078886 Krtap9-1Q64526 186 aa1.61□□□□□ -2.15
Spen-201ENSMUST00000078886 A030005L19RikA0A1Y7VIU2 113 aa1.57□□□□□ -2.16
Spen-201ENSMUST00000078886 Gm11567Q9D141 195 aa1.57□□□□□ -2.16
Spen-201ENSMUST00000078886 Gm10229O08631 77 aa1.57□□□□□ -2.16
Spen-201ENSMUST00000078886 Gm11555B1AQ89 175 aa1.56□□□□□ -2.16
Spen-201ENSMUST00000078886 Gm11559Q9D3H7 191 aa1.56□□□□□ -2.16
Spen-201ENSMUST00000078886 AhnakE9Q616 5656 aaKnown RBP1.42□□□□□ -2.18
Spen-201ENSMUST00000078886 A0A286YCP9 139 aa1.42□□□□□ -2.18
Spen-201ENSMUST00000078886 Krtap5-2Q9D5Z7 189 aa1.24□□□□□ -2.21
Spen-201ENSMUST00000078886 Krtap6-2O08884 159 aa1.22□□□□□ -2.21
Spen-201ENSMUST00000078886 Krtap21-1Q925H4 128 aa1.15□□□□□ -2.23
Spen-201ENSMUST00000078886 Gm4553A0A1B0GSA9 284 aa1.13□□□□□ -2.23
Spen-201ENSMUST00000078886 Gm10153A0A1B0GRL1 320 aa1.09□□□□□ -2.23
Spen-201ENSMUST00000078886 Gm2431E9Q8S1 172 aa1.02□□□□□ -2.25
Spen-201ENSMUST00000078886 Gm40460A0A1B0GR10 244 aa0.99□□□□□ -2.25
Spen-201ENSMUST00000078886 Gm7579A0A1B0GRJ4 243 aa0.99□□□□□ -2.25
Spen-201ENSMUST00000078886 Krtap5-5Q2TA51 241 aa0.99□□□□□ -2.25
Spen-201ENSMUST00000078886 Krtap5-4Q62220 223 aa0.99□□□□□ -2.25
Spen-201ENSMUST00000078886 Gm45337A0A1B0GS71 263 aa0.98□□□□□ -2.25
Spen-201ENSMUST00000078886 Gm39115A0A1B0GSH7 232 aa0.95□□□□□ -2.26
Spen-201ENSMUST00000078886 Gm45618A0A1B0GSA0 219 aa0.79□□□□□ -2.28
Spen-201ENSMUST00000078886 Gm29735A0A1B0GT06 219 aa0.79□□□□□ -2.28
Spen-201ENSMUST00000078886 Krtap5-1Q64507 230 aa0.67□□□□□ -2.3
Spen-201ENSMUST00000078886 Gm4559A4IF42 199 aa0.63□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 83.8 ms