RNA–Protein interactions for RNA: ENSMUST00000053252.8

Ctxn1-201, Transcript of Cortexin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctxn1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctxn1-201ENSMUST00000053252 Gm11559Q9D3H7 191 aa7.82□□□□□ -1.16
Ctxn1-201ENSMUST00000053252 Lce1kJ3QP15 125 aa7.8□□□□□ -1.16
Ctxn1-201ENSMUST00000053252 Gm11639A0A1D5RLM8 5808 aa7.79□□□□□ -1.16
Ctxn1-201ENSMUST00000053252 Gm11554B1AQB2 190 aa7.72□□□□□ -1.17
Ctxn1-201ENSMUST00000053252 A030005L19RikA0A1Y7VIU2 113 aa7.71□□□□□ -1.18
Ctxn1-201ENSMUST00000053252 Tnp1P10856 55 aa7.7□□□□□ -1.18
Ctxn1-201ENSMUST00000053252 Gm40193A0A1B0GT39 78 aa7.68□□□□□ -1.18
Ctxn1-201ENSMUST00000053252 Gm10272F7CZ33 110 aa7.59□□□□□ -1.19
Ctxn1-201ENSMUST00000053252 Gm11568A2A4M2 211 aa7.56□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Krtap9-1Q64526 186 aa7.56□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Gm4553A0A1B0GSA9 284 aa7.55□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Macf1Q9QXZ0 7354 aaKnown RBP7.55□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Lce3bQ9CQM7 98 aa7.54□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Gpr98Q8VHN7 6298 aaKnown RBP7.54□□□□□ -1.2
Ctxn1-201ENSMUST00000053252 Syne1Q6ZWR6 8799 aa7.47□□□□□ -1.21
Ctxn1-201ENSMUST00000053252 Kmt2dQ6PDK2 5588 aa7.41□□□□□ -1.22
Ctxn1-201ENSMUST00000053252 Gm2431E9Q8S1 172 aa7.35□□□□□ -1.23
Ctxn1-201ENSMUST00000053252 Lce1fB9EJP6 147 aa7.29□□□□□ -1.24
Ctxn1-201ENSMUST00000053252 Lce1cQ9D1C5 147 aa7.29□□□□□ -1.24
Ctxn1-201ENSMUST00000053252 Muc19Q6PZE0 7524 aa7.24□□□□□ -1.25
Ctxn1-201ENSMUST00000053252 SvipQ3UZP4 77 aa7.23□□□□□ -1.25
Ctxn1-201ENSMUST00000053252 Gm45337A0A1B0GS71 263 aa7.2□□□□□ -1.26
Ctxn1-201ENSMUST00000053252 Gm11938Q9D3H4 131 aa7.13□□□□□ -1.27
Ctxn1-201ENSMUST00000053252 Mp68P56379 58 aa7.09□□□□□ -1.27
Ctxn1-201ENSMUST00000053252 Krtap19-4Q925H7 84 aa7□□□□□ -1.29
Ctxn1-201ENSMUST00000053252 Gm10153A0A1B0GRL1 320 aa6.99□□□□□ -1.29
Ctxn1-201ENSMUST00000053252 Gm40460A0A1B0GR10 244 aa6.93□□□□□ -1.3
Ctxn1-201ENSMUST00000053252 Gm7579A0A1B0GRJ4 243 aa6.93□□□□□ -1.3
Ctxn1-201ENSMUST00000053252 Krtap5-5Q2TA51 241 aa6.93□□□□□ -1.3
Ctxn1-201ENSMUST00000053252 Krtap5-4Q62220 223 aa6.93□□□□□ -1.3
Ctxn1-201ENSMUST00000053252 Mt1P02802 61 aaKnown RBP6.92□□□□□ -1.3
Ctxn1-201ENSMUST00000053252 Hmcn1D3YXG0 5634 aa6.89□□□□□ -1.31
Ctxn1-201ENSMUST00000053252 Gm39115A0A1B0GSH7 232 aa6.88□□□□□ -1.31
Ctxn1-201ENSMUST00000053252 Lce3cQ91V05 98 aa6.79□□□□□ -1.32
Ctxn1-201ENSMUST00000053252 DstQ91ZU6 7393 aaKnown RBP6.7□□□□□ -1.34
Ctxn1-201ENSMUST00000053252 Lce3dE9Q8V1 98 aa6.7□□□□□ -1.34
Ctxn1-201ENSMUST00000053252 NebE9Q1W3 7152 aa6.68□□□□□ -1.34
Ctxn1-201ENSMUST00000053252 Sprr2dO70555 85 aa6.62□□□□□ -1.35
Ctxn1-201ENSMUST00000053252 Krtap4-16Q91W93 202 aa6.6□□□□□ -1.35
Ctxn1-201ENSMUST00000053252 Lce3eF8VQJ0 98 aa6.55□□□□□ -1.36
Ctxn1-201ENSMUST00000053252 Lce3fQ6PAI4 98 aa6.55□□□□□ -1.36
Ctxn1-201ENSMUST00000053252 Gm20538F6Z9R1 75 aa6.5□□□□□ -1.37
Ctxn1-201ENSMUST00000053252 Sprr2fO70557 76 aa6.5□□□□□ -1.37
Ctxn1-201ENSMUST00000053252 Gm45618A0A1B0GSA0 219 aa6.45□□□□□ -1.38
Ctxn1-201ENSMUST00000053252 Mt3P28184 68 aa6.43□□□□□ -1.38
Ctxn1-201ENSMUST00000053252 ObscnA2AAJ9 8891 aaKnown RBP6.4□□□□□ -1.39
Ctxn1-201ENSMUST00000053252 4933428G20RikQ9D3X4 101 aa6.37□□□□□ -1.39
Ctxn1-201ENSMUST00000053252 Lce3aQ497I5 98 aa6.28□□□□□ -1.4
Ctxn1-201ENSMUST00000053252 AhnakE9Q616 5656 aaKnown RBP6.18□□□□□ -1.42
Ctxn1-201ENSMUST00000053252 Gm10100J3QK64 120 aa6.08□□□□□ -1.44
Ctxn1-201ENSMUST00000053252 A0A1Y7VLE6 161 aa6.04□□□□□ -1.44
Ctxn1-201ENSMUST00000053252 Gm10142J3KMP7 120 aa5.88□□□□□ -1.47
Ctxn1-201ENSMUST00000053252 Krtap31-2Q8CAY5 177 aa5.78□□□□□ -1.48
Ctxn1-201ENSMUST00000053252 Sprr2eO70556 76 aa5.7□□□□□ -1.5
Ctxn1-201ENSMUST00000053252 Sprr2hO70559 108 aa5.7□□□□□ -1.5
Ctxn1-201ENSMUST00000053252 Ndufaf8A2AMZ4 74 aa5.56□□□□□ -1.52
Ctxn1-201ENSMUST00000053252 Gm10024A0A0A0MQA4 119 aa5.46□□□□□ -1.54
Ctxn1-201ENSMUST00000053252 Krtap28-10A0A1Y7VP58 119 aa5.45□□□□□ -1.54
Ctxn1-201ENSMUST00000053252 Krtap28-13A0A087WQP5 138 aa5.4□□□□□ -1.54
Ctxn1-201ENSMUST00000053252 Krtap31-1Q9D644 177 aa5.36□□□□□ -1.55
Ctxn1-201ENSMUST00000053252 A030005K14RikA0A1Y7VNY1 122 aa5.31□□□□□ -1.56
Ctxn1-201ENSMUST00000053252 A0A1Y7VJ07 166 aa5.16□□□□□ -1.58
Ctxn1-201ENSMUST00000053252 Gm29735A0A1B0GT06 219 aa5.07□□□□□ -1.6
Ctxn1-201ENSMUST00000053252 Muc16A0A140LJ72 8478 aa5.04□□□□□ -1.6
Ctxn1-201ENSMUST00000053252 1110025L11RikO09048 78 aa5.02□□□□□ -1.61
Ctxn1-201ENSMUST00000053252 Krtap6-5Q925H3 78 aa5.02□□□□□ -1.61
Ctxn1-201ENSMUST00000053252 A030014E15RikA0A1Y7VJV2 120 aa4.87□□□□□ -1.63
Ctxn1-201ENSMUST00000053252 Gm7544A0A1Y7VJ58 118 aa4.84□□□□□ -1.63
Ctxn1-201ENSMUST00000053252 Gm11567Q9D141 195 aa4.8□□□□□ -1.64
Ctxn1-201ENSMUST00000053252 Gm10229O08631 77 aa4.49□□□□□ -1.69
Ctxn1-201ENSMUST00000053252 Gm9112A2AI92 75 aa4.32□□□□□ -1.72
Ctxn1-201ENSMUST00000053252 A030003K21RikA0A1Y7VIM3 128 aa4.22□□□□□ -1.73
Ctxn1-201ENSMUST00000053252 Sprr2bO70554 98 aa4.1□□□□□ -1.75
Ctxn1-201ENSMUST00000053252 Krtap21-1Q925H4 128 aa4.06□□□□□ -1.76
Ctxn1-201ENSMUST00000053252 Gm6217A0A1Y7VJK9 128 aa4.03□□□□□ -1.76
Ctxn1-201ENSMUST00000053252 Krtap5-1Q64507 230 aa4.03□□□□□ -1.76
Ctxn1-201ENSMUST00000053252 A0A286YCP9 139 aa4□□□□□ -1.77
Ctxn1-201ENSMUST00000053252 Krtap6-2O08884 159 aa3.98□□□□□ -1.77
Ctxn1-201ENSMUST00000053252 Phgr1Q8K0G7 91 aa3.41□□□□□ -1.86
Ctxn1-201ENSMUST00000053252 Gm4559A4IF42 199 aa2.96□□□□□ -1.94
Retrieved 80 of 22,080 RNA–protein pairs in 7.8 ms