RNA–Protein interactions for RNA: ENSMUST00000046901.13

Pdgfa-201, Transcript of Platelet-derived growth factor subunit A, mousemouse

TSL 1 (best) BASIC

Gene Pdgfa, Length 1,543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfa-201ENSMUST00000046901 A030003K21RikA0A1Y7VIM3 128 aa6.49□□□□□ -1.37
Pdgfa-201ENSMUST00000046901 Lce1dQ9D731 133 aa6.46□□□□□ -1.37
Pdgfa-201ENSMUST00000046901 Lce1hQ9D6R3 140 aa6.45□□□□□ -1.38
Pdgfa-201ENSMUST00000046901 2310046K23RikA0A0A6YVW6 87 aa6.38□□□□□ -1.39
Pdgfa-201ENSMUST00000046901 Romo1P60603 79 aa6.38□□□□□ -1.39
Pdgfa-201ENSMUST00000046901 Krtap7-1Q9D3I6 87 aa6.34□□□□□ -1.39
Pdgfa-201ENSMUST00000046901 Lce1eQ9D139 143 aa6.33□□□□□ -1.4
Pdgfa-201ENSMUST00000046901 Sprr2iO70560 76 aa6.26□□□□□ -1.41
Pdgfa-201ENSMUST00000046901 Lce1kJ3QP15 125 aa6.25□□□□□ -1.41
Pdgfa-201ENSMUST00000046901 Gm10272F7CZ33 110 aa6.24□□□□□ -1.41
Pdgfa-201ENSMUST00000046901 Krtap5-2Q9D5Z7 189 aa6.23□□□□□ -1.41
Pdgfa-201ENSMUST00000046901 Lce3bQ9CQM7 98 aa6.18□□□□□ -1.42
Pdgfa-201ENSMUST00000046901 Gm6217A0A1Y7VJK9 128 aa6.16□□□□□ -1.42
Pdgfa-201ENSMUST00000046901 Syne1Q6ZWR6 8799 aa6.16□□□□□ -1.42
Pdgfa-201ENSMUST00000046901 Gm11559Q9D3H7 191 aa6.09□□□□□ -1.44
Pdgfa-201ENSMUST00000046901 Gm11568A2A4M2 211 aa6.04□□□□□ -1.44
Pdgfa-201ENSMUST00000046901 Krtap9-1Q64526 186 aa6.04□□□□□ -1.44
Pdgfa-201ENSMUST00000046901 Gm11554B1AQB2 190 aa5.97□□□□□ -1.45
Pdgfa-201ENSMUST00000046901 Tnp1P10856 55 aa5.96□□□□□ -1.46
Pdgfa-201ENSMUST00000046901 Eppk1Q8R0W0 6548 aa5.94□□□□□ -1.46
Pdgfa-201ENSMUST00000046901 Gm4553A0A1B0GSA9 284 aa5.92□□□□□ -1.46
Pdgfa-201ENSMUST00000046901 Lce1fB9EJP6 147 aa5.9□□□□□ -1.46
Pdgfa-201ENSMUST00000046901 Lce1cQ9D1C5 147 aa5.9□□□□□ -1.46
Pdgfa-201ENSMUST00000046901 Macf1Q9QXZ0 7354 aaKnown RBP5.83□□□□□ -1.48
Pdgfa-201ENSMUST00000046901 Kmt2dQ6PDK2 5588 aa5.8□□□□□ -1.48
Pdgfa-201ENSMUST00000046901 Gm40193A0A1B0GT39 78 aa5.78□□□□□ -1.48
Pdgfa-201ENSMUST00000046901 Gm2431E9Q8S1 172 aa5.75□□□□□ -1.49
Pdgfa-201ENSMUST00000046901 Krtap31-2Q8CAY5 177 aa5.73□□□□□ -1.49
Pdgfa-201ENSMUST00000046901 Gm11938Q9D3H4 131 aa5.73□□□□□ -1.49
Pdgfa-201ENSMUST00000046901 Gm45337A0A1B0GS71 263 aa5.69□□□□□ -1.5
Pdgfa-201ENSMUST00000046901 Mt1P02802 61 aaKnown RBP5.68□□□□□ -1.5
Pdgfa-201ENSMUST00000046901 A0A286YCP9 139 aa5.64□□□□□ -1.51
Pdgfa-201ENSMUST00000046901 Gm10153A0A1B0GRL1 320 aa5.6□□□□□ -1.51
Pdgfa-201ENSMUST00000046901 Krtap19-4Q925H7 84 aa5.6□□□□□ -1.51
Pdgfa-201ENSMUST00000046901 Lce3cQ91V05 98 aa5.58□□□□□ -1.52
Pdgfa-201ENSMUST00000046901 Gm11639A0A1D5RLM8 5808 aa5.53□□□□□ -1.52
Pdgfa-201ENSMUST00000046901 Gm40460A0A1B0GR10 244 aa5.5□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Gm7579A0A1B0GRJ4 243 aa5.5□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Krtap5-5Q2TA51 241 aa5.5□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Krtap5-4Q62220 223 aa5.5□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Lce3dE9Q8V1 98 aa5.48□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Hmcn1D3YXG0 5634 aa5.47□□□□□ -1.53
Pdgfa-201ENSMUST00000046901 Muc19Q6PZE0 7524 aa5.4□□□□□ -1.54
Pdgfa-201ENSMUST00000046901 Gm39115A0A1B0GSH7 232 aa5.36□□□□□ -1.55
Pdgfa-201ENSMUST00000046901 Mp68P56379 58 aa5.36□□□□□ -1.55
Pdgfa-201ENSMUST00000046901 Gm20538F6Z9R1 75 aa5.35□□□□□ -1.55
Pdgfa-201ENSMUST00000046901 Lce3eF8VQJ0 98 aa5.34□□□□□ -1.55
Pdgfa-201ENSMUST00000046901 Lce3fQ6PAI4 98 aa5.34□□□□□ -1.55
Pdgfa-201ENSMUST00000046901 ObscnA2AAJ9 8891 aaKnown RBP5.27□□□□□ -1.57
Pdgfa-201ENSMUST00000046901 Mt3P28184 68 aa5.24□□□□□ -1.57
Pdgfa-201ENSMUST00000046901 DstQ91ZU6 7393 aaKnown RBP5.21□□□□□ -1.58
Pdgfa-201ENSMUST00000046901 Gpr98Q8VHN7 6298 aaKnown RBP5.2□□□□□ -1.58
Pdgfa-201ENSMUST00000046901 4933428G20RikQ9D3X4 101 aa5.18□□□□□ -1.58
Pdgfa-201ENSMUST00000046901 Sprr2dO70555 85 aa5.17□□□□□ -1.58
Pdgfa-201ENSMUST00000046901 Krtap31-1Q9D644 177 aa5.13□□□□□ -1.59
Pdgfa-201ENSMUST00000046901 Lce3aQ497I5 98 aa5.12□□□□□ -1.59
Pdgfa-201ENSMUST00000046901 Sprr2fO70557 76 aa5.03□□□□□ -1.6
Pdgfa-201ENSMUST00000046901 Krtap4-16Q91W93 202 aa5.02□□□□□ -1.61
Pdgfa-201ENSMUST00000046901 NebE9Q1W3 7152 aa4.99□□□□□ -1.61
Pdgfa-201ENSMUST00000046901 Gm10100J3QK64 120 aa4.96□□□□□ -1.62
Pdgfa-201ENSMUST00000046901 Gm45618A0A1B0GSA0 219 aa4.95□□□□□ -1.62
Pdgfa-201ENSMUST00000046901 Ndufaf8A2AMZ4 74 aa4.94□□□□□ -1.62
Pdgfa-201ENSMUST00000046901 AhnakE9Q616 5656 aaKnown RBP4.9□□□□□ -1.63
Pdgfa-201ENSMUST00000046901 Sprr2eO70556 76 aa4.66□□□□□ -1.66
Pdgfa-201ENSMUST00000046901 Gm10142J3KMP7 120 aa4.62□□□□□ -1.67
Pdgfa-201ENSMUST00000046901 Gm10024A0A0A0MQA4 119 aa4.49□□□□□ -1.69
Pdgfa-201ENSMUST00000046901 Sprr2hO70559 108 aa4.46□□□□□ -1.69
Pdgfa-201ENSMUST00000046901 Gm29735A0A1B0GT06 219 aa4.42□□□□□ -1.7
Pdgfa-201ENSMUST00000046901 Gm9112A2AI92 75 aa4.42□□□□□ -1.7
Pdgfa-201ENSMUST00000046901 Gm11567Q9D141 195 aa4.34□□□□□ -1.71
Pdgfa-201ENSMUST00000046901 1110025L11RikO09048 78 aa4.1□□□□□ -1.75
Pdgfa-201ENSMUST00000046901 Krtap6-5Q925H3 78 aa4.1□□□□□ -1.75
Pdgfa-201ENSMUST00000046901 Muc16A0A140LJ72 8478 aa4.06□□□□□ -1.76
Pdgfa-201ENSMUST00000046901 Gm10229O08631 77 aa3.68□□□□□ -1.82
Pdgfa-201ENSMUST00000046901 Krtap21-1Q925H4 128 aa3.31□□□□□ -1.88
Pdgfa-201ENSMUST00000046901 Krtap6-2O08884 159 aa3.25□□□□□ -1.89
Pdgfa-201ENSMUST00000046901 Sprr2bO70554 98 aa3.22□□□□□ -1.89
Pdgfa-201ENSMUST00000046901 Krtap5-1Q64507 230 aa3.15□□□□□ -1.9
Pdgfa-201ENSMUST00000046901 Gm4559A4IF42 199 aa3.12□□□□□ -1.91
Pdgfa-201ENSMUST00000046901 Phgr1Q8K0G7 91 aa2.69□□□□□ -1.98
Retrieved 80 of 22,080 RNA–protein pairs in 93.5 ms