RNA–Protein interactions for RNA: ENSMUST00000046898.15

Rfx3-201, Transcript of Transcription factor RFX3, mousemouse

TSL 1 (best) BASIC

Gene Rfx3, Length 4,274 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3-201ENSMUST00000046898 Krtap9-3Q3V2C1 136 aa2.29□□□□□ -2.04
Rfx3-201ENSMUST00000046898 Gm38119A0A0A6YX29 146 aa2.28□□□□□ -2.04
Rfx3-201ENSMUST00000046898 Muc5bE9Q5I3 4800 aa2.26□□□□□ -2.05
Rfx3-201ENSMUST00000046898 SspoQ8CG65 4998 aa2.25□□□□□ -2.05
Rfx3-201ENSMUST00000046898 Gm10100J3QK64 120 aa2.25□□□□□ -2.05
Rfx3-201ENSMUST00000046898 Lce3cQ91V05 98 aa2.23□□□□□ -2.05
Rfx3-201ENSMUST00000046898 Gm11596B1AQB0 205 aa2.22□□□□□ -2.05
Rfx3-201ENSMUST00000046898 Mt4P47945 62 aa2.22□□□□□ -2.05
Rfx3-201ENSMUST00000046898 Sprr2iO70560 76 aa2.2□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Gm11564A2A4L9 201 aa2.18□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Gm11595B1AQA7 289 aa2.18□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Krtap4-8B1AQA8 209 aa2.18□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Muc16A0A140LJ72 8478 aa2.18□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Gm10142J3KMP7 120 aa2.17□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Lce3eF8VQJ0 98 aa2.17□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Lce3fQ6PAI4 98 aa2.17□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Lce3dE9Q8V1 98 aa2.16□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Gm11562A0PK51 136 aa2.15□□□□□ -2.06
Rfx3-201ENSMUST00000046898 Krtap4-9B1AQA9 244 aa2.15□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1a1Q9CQH5 143 aa2.13□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Syne2Q6ZWQ0 6874 aaKnown RBP2.12□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1fB9EJP6 147 aa2.12□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1cQ9D1C5 147 aa2.12□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1lQ9D1G7 135 aa2.12□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1dQ9D731 133 aa2.12□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce1eQ9D139 143 aa2.11□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Krtap19-4Q925H7 84 aa2.1□□□□□ -2.07
Rfx3-201ENSMUST00000046898 Lce3aQ497I5 98 aa2.09□□□□□ -2.07
Rfx3-201ENSMUST00000046898 2300003K06RikA2A4M0 262 aa2.08□□□□□ -2.08
Rfx3-201ENSMUST00000046898 Fsip2A2ARZ3 6995 aa2.08□□□□□ -2.08
Rfx3-201ENSMUST00000046898 Krtap4-13Q9D7P3 165 aa2.07□□□□□ -2.08
Rfx3-201ENSMUST00000046898 Gm11938Q9D3H4 131 aa2.04□□□□□ -2.08
Rfx3-201ENSMUST00000046898 Sprr2dO70555 85 aa2.02□□□□□ -2.09
Rfx3-201ENSMUST00000046898 Gm11559Q9D3H7 191 aa1.99□□□□□ -2.09
Rfx3-201ENSMUST00000046898 Krtap6-3A0A087WQL6 57 aa1.98□□□□□ -2.09
Rfx3-201ENSMUST00000046898 Lce1kJ3QP15 125 aa1.97□□□□□ -2.09
Rfx3-201ENSMUST00000046898 Macf1Q9QXZ0 7354 aaKnown RBP1.97□□□□□ -2.09
Rfx3-201ENSMUST00000046898 Krtap4-16Q91W93 202 aa1.95□□□□□ -2.1
Rfx3-201ENSMUST00000046898 Gm10024A0A0A0MQA4 119 aa1.95□□□□□ -2.1
Rfx3-201ENSMUST00000046898 Sprr2fO70557 76 aa1.95□□□□□ -2.1
Rfx3-201ENSMUST00000046898 ObscnA2AAJ9 8891 aaKnown RBP1.93□□□□□ -2.1
Rfx3-201ENSMUST00000046898 Sprr2eO70556 76 aa1.9□□□□□ -2.1
Rfx3-201ENSMUST00000046898 Krtap20-2E9Q0A8 60 aa1.85□□□□□ -2.11
Rfx3-201ENSMUST00000046898 Mt3P28184 68 aa1.84□□□□□ -2.12
Rfx3-201ENSMUST00000046898 Sprr2hO70559 108 aa1.83□□□□□ -2.12
Rfx3-201ENSMUST00000046898 Mt1P02802 61 aaKnown RBP1.83□□□□□ -2.12
Rfx3-201ENSMUST00000046898 Gm11554B1AQB2 190 aa1.76□□□□□ -2.13
Rfx3-201ENSMUST00000046898 DstQ91ZU6 7393 aaKnown RBP1.76□□□□□ -2.13
Rfx3-201ENSMUST00000046898 NebE9Q1W3 7152 aa1.68□□□□□ -2.14
Rfx3-201ENSMUST00000046898 Gm45618A0A1B0GSA0 219 aa1.67□□□□□ -2.14
Rfx3-201ENSMUST00000046898 Gm11568A2A4M2 211 aa1.65□□□□□ -2.15
Rfx3-201ENSMUST00000046898 Krtap9-1Q64526 186 aa1.65□□□□□ -2.15
Rfx3-201ENSMUST00000046898 Eppk1Q8R0W0 6548 aa1.63□□□□□ -2.15
Rfx3-201ENSMUST00000046898 Krtap5-2Q9D5Z7 189 aa1.63□□□□□ -2.15
Rfx3-201ENSMUST00000046898 Muc19Q6PZE0 7524 aa1.58□□□□□ -2.16
Rfx3-201ENSMUST00000046898 Gm39115A0A1B0GSH7 232 aa1.56□□□□□ -2.16
Rfx3-201ENSMUST00000046898 Gm2431E9Q8S1 172 aa1.55□□□□□ -2.16
Rfx3-201ENSMUST00000046898 Kmt2dQ6PDK2 5588 aa1.55□□□□□ -2.16
Rfx3-201ENSMUST00000046898 Gm4553A0A1B0GSA9 284 aa1.53□□□□□ -2.16
Rfx3-201ENSMUST00000046898 Gm29735A0A1B0GT06 219 aa1.47□□□□□ -2.17
Rfx3-201ENSMUST00000046898 Sprr2bO70554 98 aa1.46□□□□□ -2.18
Rfx3-201ENSMUST00000046898 1110025L11RikO09048 78 aa1.45□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Krtap6-5Q925H3 78 aa1.45□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gm10153A0A1B0GRL1 320 aa1.45□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Hmcn1D3YXG0 5634 aa1.44□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gm45337A0A1B0GS71 263 aa1.43□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gm11639A0A1D5RLM8 5808 aa1.42□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gpr98Q8VHN7 6298 aaKnown RBP1.42□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gm11567Q9D141 195 aa1.41□□□□□ -2.18
Rfx3-201ENSMUST00000046898 Gm40460A0A1B0GR10 244 aa1.4□□□□□ -2.19
Rfx3-201ENSMUST00000046898 Gm7579A0A1B0GRJ4 243 aa1.4□□□□□ -2.19
Rfx3-201ENSMUST00000046898 Krtap5-5Q2TA51 241 aa1.4□□□□□ -2.19
Rfx3-201ENSMUST00000046898 Krtap5-4Q62220 223 aa1.4□□□□□ -2.19
Rfx3-201ENSMUST00000046898 Gm10229O08631 77 aa1.33□□□□□ -2.2
Rfx3-201ENSMUST00000046898 AhnakE9Q616 5656 aaKnown RBP1.28□□□□□ -2.21
Rfx3-201ENSMUST00000046898 Krtap5-1Q64507 230 aa1.21□□□□□ -2.22
Rfx3-201ENSMUST00000046898 Phgr1Q8K0G7 91 aa1.21□□□□□ -2.22
Rfx3-201ENSMUST00000046898 Gm4559A4IF42 199 aa1.12□□□□□ -2.23
Rfx3-201ENSMUST00000046898 Krtap6-2O08884 159 aa1.12□□□□□ -2.23
Rfx3-201ENSMUST00000046898 Krtap21-1Q925H4 128 aa1.1□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 54.5 ms