RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Mt2P02798 61 aa2.9□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Gm11564A2A4L9 201 aa2.9□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Gm11595B1AQA7 289 aa2.9□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Krtap4-8B1AQA8 209 aa2.9□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Gm10272F7CZ33 110 aa2.89□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Lce1eQ9D139 143 aa2.89□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Gm11938Q9D3H4 131 aa2.89□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Sprr2dO70555 85 aa2.87□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Gm6358A0A087WPH4 74 aa2.84□□□□□ -1.95
Cdc40-201ENSMUST00000044166 Krtap4-9B1AQA9 244 aa2.8□□□□□ -1.96
Cdc40-201ENSMUST00000044166 Muc16A0A140LJ72 8478 aa2.76□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Krtap6-3A0A087WQL6 57 aa2.75□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Fsip2A2ARZ3 6995 aa2.75□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Krtap4-16Q91W93 202 aa2.74□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Gm10100J3QK64 120 aa2.73□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Sprr2iO70560 76 aa2.72□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Krtap22-2J3QNX6 67 aa2.72□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Mt4P47945 62 aa2.72□□□□□ -1.97
Cdc40-201ENSMUST00000044166 Lce1cQ9D1C5 147 aa2.71□□□□□ -1.98
Cdc40-201ENSMUST00000044166 Krtap4-13Q9D7P3 165 aa2.71□□□□□ -1.98
Cdc40-201ENSMUST00000044166 2300003K06RikA2A4M0 262 aa2.67□□□□□ -1.98
Cdc40-201ENSMUST00000044166 Macf1Q9QXZ0 7354 aaKnown RBP2.66□□□□□ -1.98
Cdc40-201ENSMUST00000044166 Gm10142J3KMP7 120 aa2.66□□□□□ -1.98
Cdc40-201ENSMUST00000044166 ObscnA2AAJ9 8891 aaKnown RBP2.66□□□□□ -1.98
Cdc40-201ENSMUST00000044166 Krtap19-4Q925H7 84 aa2.66□□□□□ -1.98
Cdc40-201ENSMUST00000044166 Lce3bQ9CQM7 98 aa2.65□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Lce1lQ9D1G7 135 aa2.64□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Sprr2kO70562 68 aa2.64□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Sprr2fO70557 76 aa2.62□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Lce1fB9EJP6 147 aa2.61□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Lce1a1Q9CQH5 143 aa2.61□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Gm10024A0A0A0MQA4 119 aa2.6□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Gm45618A0A1B0GSA0 219 aa2.59□□□□□ -1.99
Cdc40-201ENSMUST00000044166 Lce3cQ91V05 98 aa2.58□□□□□ -2
Cdc40-201ENSMUST00000044166 Lce3dE9Q8V1 98 aa2.57□□□□□ -2
Cdc40-201ENSMUST00000044166 Sprr2hO70559 108 aa2.53□□□□□ -2
Cdc40-201ENSMUST00000044166 Lce1bQ9D149 137 aa2.52□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Sprr2eO70556 76 aa2.51□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Gm38119A0A0A6YX29 146 aa2.51□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Krtap20-2E9Q0A8 60 aa2.51□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Lce3eF8VQJ0 98 aa2.49□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Lce3fQ6PAI4 98 aa2.49□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Lce3aQ497I5 98 aa2.48□□□□□ -2.01
Cdc40-201ENSMUST00000044166 Eppk1Q8R0W0 6548 aa2.45□□□□□ -2.02
Cdc40-201ENSMUST00000044166 DstQ91ZU6 7393 aaKnown RBP2.34□□□□□ -2.03
Cdc40-201ENSMUST00000044166 Gm11639A0A1D5RLM8 5808 aa2.3□□□□□ -2.04
Cdc40-201ENSMUST00000044166 Gm39115A0A1B0GSH7 232 aa2.29□□□□□ -2.04
Cdc40-201ENSMUST00000044166 Muc19Q6PZE0 7524 aa2.28□□□□□ -2.04
Cdc40-201ENSMUST00000044166 Gpr98Q8VHN7 6298 aaKnown RBP2.26□□□□□ -2.05
Cdc40-201ENSMUST00000044166 Gm11554B1AQB2 190 aa2.25□□□□□ -2.05
Cdc40-201ENSMUST00000044166 Gm11559Q9D3H7 191 aa2.23□□□□□ -2.05
Cdc40-201ENSMUST00000044166 Mt1P02802 61 aaKnown RBP2.2□□□□□ -2.06
Cdc40-201ENSMUST00000044166 NebE9Q1W3 7152 aa2.19□□□□□ -2.06
Cdc40-201ENSMUST00000044166 Gm29735A0A1B0GT06 219 aa2.17□□□□□ -2.06
Cdc40-201ENSMUST00000044166 Krtap5-2Q9D5Z7 189 aa2.16□□□□□ -2.06
Cdc40-201ENSMUST00000044166 Gm11568A2A4M2 211 aa2.15□□□□□ -2.06
Cdc40-201ENSMUST00000044166 Kmt2dQ6PDK2 5588 aa2.15□□□□□ -2.07
Cdc40-201ENSMUST00000044166 Lce1kJ3QP15 125 aa2.12□□□□□ -2.07
Cdc40-201ENSMUST00000044166 Gm4553A0A1B0GSA9 284 aa2.11□□□□□ -2.07
Cdc40-201ENSMUST00000044166 Gm2431E9Q8S1 172 aa2.06□□□□□ -2.08
Cdc40-201ENSMUST00000044166 Krtap9-1Q64526 186 aa2.03□□□□□ -2.08
Cdc40-201ENSMUST00000044166 Gm11567Q9D141 195 aa2.01□□□□□ -2.09
Cdc40-201ENSMUST00000044166 Gm45337A0A1B0GS71 263 aa1.97□□□□□ -2.09
Cdc40-201ENSMUST00000044166 Hmcn1D3YXG0 5634 aa1.96□□□□□ -2.1
Cdc40-201ENSMUST00000044166 Mt3P28184 68 aa1.93□□□□□ -2.1
Cdc40-201ENSMUST00000044166 Gm10153A0A1B0GRL1 320 aa1.89□□□□□ -2.11
Cdc40-201ENSMUST00000044166 Gm40460A0A1B0GR10 244 aa1.88□□□□□ -2.11
Cdc40-201ENSMUST00000044166 Gm7579A0A1B0GRJ4 243 aa1.88□□□□□ -2.11
Cdc40-201ENSMUST00000044166 Krtap5-5Q2TA51 241 aa1.88□□□□□ -2.11
Cdc40-201ENSMUST00000044166 Krtap5-4Q62220 223 aa1.88□□□□□ -2.11
Cdc40-201ENSMUST00000044166 Krtap5-1Q64507 230 aa1.83□□□□□ -2.12
Cdc40-201ENSMUST00000044166 AhnakE9Q616 5656 aaKnown RBP1.79□□□□□ -2.12
Cdc40-201ENSMUST00000044166 Gm4559A4IF42 199 aa1.78□□□□□ -2.12
Cdc40-201ENSMUST00000044166 1110025L11RikO09048 78 aa1.74□□□□□ -2.13
Cdc40-201ENSMUST00000044166 Krtap6-5Q925H3 78 aa1.74□□□□□ -2.13
Cdc40-201ENSMUST00000044166 Sprr2bO70554 98 aa1.69□□□□□ -2.14
Cdc40-201ENSMUST00000044166 Phgr1Q8K0G7 91 aa1.56□□□□□ -2.16
Cdc40-201ENSMUST00000044166 Gm10229O08631 77 aa1.53□□□□□ -2.16
Cdc40-201ENSMUST00000044166 Krtap21-1Q925H4 128 aa1.43□□□□□ -2.18
Cdc40-201ENSMUST00000044166 Krtap6-2O08884 159 aa1.26□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 79.6 ms