RNA–Protein interactions for RNA: ENSMUST00000043634.11

Scube1-202, Transcript of Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scube1, Length 5,161 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1-202ENSMUST00000043634 Krtap4-1Q3UUY3 169 aa5.71□□□□□ -1.5
Scube1-202ENSMUST00000043634 Krtap31-1Q9D644 177 aa5.7□□□□□ -1.5
Scube1-202ENSMUST00000043634 Gm11562A0PK51 136 aa5.69□□□□□ -1.5
Scube1-202ENSMUST00000043634 Muc5bE9Q5I3 4800 aa5.67□□□□□ -1.5
Scube1-202ENSMUST00000043634 Gm11938Q9D3H4 131 aa5.66□□□□□ -1.5
Scube1-202ENSMUST00000043634 Hmcn2A2AJ76 5100 aa5.64□□□□□ -1.51
Scube1-202ENSMUST00000043634 Gm11596B1AQB0 205 aa5.62□□□□□ -1.51
Scube1-202ENSMUST00000043634 Rnf213E9Q555 5152 aaKnown RBP5.61□□□□□ -1.51
Scube1-202ENSMUST00000043634 Gm11564A2A4L9 201 aa5.59□□□□□ -1.51
Scube1-202ENSMUST00000043634 Gm11563B1AQ90 168 aa5.59□□□□□ -1.51
Scube1-202ENSMUST00000043634 Gm11595B1AQA7 289 aa5.59□□□□□ -1.51
Scube1-202ENSMUST00000043634 Krtap4-8B1AQA8 209 aa5.59□□□□□ -1.51
Scube1-202ENSMUST00000043634 2300003K06RikA2A4M0 262 aa5.59□□□□□ -1.52
Scube1-202ENSMUST00000043634 Krtap4-9B1AQA9 244 aa5.56□□□□□ -1.52
Scube1-202ENSMUST00000043634 Krtap17-1A2A5X6 109 aa5.55□□□□□ -1.52
Scube1-202ENSMUST00000043634 Krtap4-7Q9D732 168 aa5.53□□□□□ -1.52
Scube1-202ENSMUST00000043634 Lce1kJ3QP15 125 aa5.47□□□□□ -1.53
Scube1-202ENSMUST00000043634 Ush2AQ2QI47 5193 aa5.46□□□□□ -1.54
Scube1-202ENSMUST00000043634 Mt3P28184 68 aa5.41□□□□□ -1.54
Scube1-202ENSMUST00000043634 Krtap4-13Q9D7P3 165 aa5.4□□□□□ -1.54
Scube1-202ENSMUST00000043634 Fsip2A2ARZ3 6995 aa5.33□□□□□ -1.56
Scube1-202ENSMUST00000043634 Syne2Q6ZWQ0 6874 aaKnown RBP5.22□□□□□ -1.57
Scube1-202ENSMUST00000043634 SspoQ8CG65 4998 aa5.21□□□□□ -1.58
Scube1-202ENSMUST00000043634 Krtap4-16Q91W93 202 aa5.14□□□□□ -1.59
Scube1-202ENSMUST00000043634 Mt1P02802 61 aaKnown RBP5.11□□□□□ -1.59
Scube1-202ENSMUST00000043634 Krtap6-3A0A087WQL6 57 aa5.04□□□□□ -1.6
Scube1-202ENSMUST00000043634 Lce1a1Q9CQH5 143 aa5.02□□□□□ -1.61
Scube1-202ENSMUST00000043634 Muc16A0A140LJ72 8478 aa5.01□□□□□ -1.61
Scube1-202ENSMUST00000043634 ObscnA2AAJ9 8891 aaKnown RBP4.96□□□□□ -1.62
Scube1-202ENSMUST00000043634 Gm11554B1AQB2 190 aa4.83□□□□□ -1.64
Scube1-202ENSMUST00000043634 Krtap20-2E9Q0A8 60 aa4.75□□□□□ -1.65
Scube1-202ENSMUST00000043634 Sprr2bO70554 98 aa4.72□□□□□ -1.65
Scube1-202ENSMUST00000043634 Eppk1Q8R0W0 6548 aa4.53□□□□□ -1.68
Scube1-202ENSMUST00000043634 Macf1Q9QXZ0 7354 aaKnown RBP4.47□□□□□ -1.69
Scube1-202ENSMUST00000043634 Krtap31-2Q8CAY5 177 aa4.46□□□□□ -1.7
Scube1-202ENSMUST00000043634 Kmt2dQ6PDK2 5588 aa4.44□□□□□ -1.7
Scube1-202ENSMUST00000043634 Gm11555B1AQ89 175 aa4.38□□□□□ -1.71
Scube1-202ENSMUST00000043634 DstQ91ZU6 7393 aaKnown RBP4.34□□□□□ -1.71
Scube1-202ENSMUST00000043634 NebE9Q1W3 7152 aa4.23□□□□□ -1.73
Scube1-202ENSMUST00000043634 1110025L11RikO09048 78 aa4.15□□□□□ -1.75
Scube1-202ENSMUST00000043634 Krtap6-5Q925H3 78 aa4.15□□□□□ -1.75
Scube1-202ENSMUST00000043634 Gm10229O08631 77 aa3.91□□□□□ -1.78
Scube1-202ENSMUST00000043634 Muc19Q6PZE0 7524 aa3.9□□□□□ -1.79
Scube1-202ENSMUST00000043634 Gm11559Q9D3H7 191 aa3.85□□□□□ -1.79
Scube1-202ENSMUST00000043634 Gm11568A2A4M2 211 aa3.82□□□□□ -1.8
Scube1-202ENSMUST00000043634 Krtap9-1Q64526 186 aa3.82□□□□□ -1.8
Scube1-202ENSMUST00000043634 Gm11639A0A1D5RLM8 5808 aa3.78□□□□□ -1.81
Scube1-202ENSMUST00000043634 Gpr98Q8VHN7 6298 aaKnown RBP3.63□□□□□ -1.83
Scube1-202ENSMUST00000043634 Phgr1Q8K0G7 91 aa3.63□□□□□ -1.83
Scube1-202ENSMUST00000043634 Krtap5-2Q9D5Z7 189 aa3.48□□□□□ -1.85
Scube1-202ENSMUST00000043634 Hmcn1D3YXG0 5634 aa3.43□□□□□ -1.86
Scube1-202ENSMUST00000043634 Gm4553A0A1B0GSA9 284 aa3.27□□□□□ -1.89
Scube1-202ENSMUST00000043634 Krtap6-2O08884 159 aa3.15□□□□□ -1.91
Scube1-202ENSMUST00000043634 AhnakE9Q616 5656 aaKnown RBP3.07□□□□□ -1.92
Scube1-202ENSMUST00000043634 Gm2431E9Q8S1 172 aa3.04□□□□□ -1.92
Scube1-202ENSMUST00000043634 Gm10153A0A1B0GRL1 320 aa2.96□□□□□ -1.93
Scube1-202ENSMUST00000043634 A030005L19RikA0A1Y7VIU2 113 aa2.95□□□□□ -1.94
Scube1-202ENSMUST00000043634 Krtap21-1Q925H4 128 aa2.94□□□□□ -1.94
Scube1-202ENSMUST00000043634 Gm45337A0A1B0GS71 263 aa2.84□□□□□ -1.96
Scube1-202ENSMUST00000043634 Gm40460A0A1B0GR10 244 aa2.82□□□□□ -1.96
Scube1-202ENSMUST00000043634 Gm7579A0A1B0GRJ4 243 aa2.82□□□□□ -1.96
Scube1-202ENSMUST00000043634 Krtap5-5Q2TA51 241 aa2.82□□□□□ -1.96
Scube1-202ENSMUST00000043634 Krtap5-4Q62220 223 aa2.82□□□□□ -1.96
Scube1-202ENSMUST00000043634 Gm39115A0A1B0GSH7 232 aa2.59□□□□□ -2
Scube1-202ENSMUST00000043634 A0A1Y7VLE6 161 aa2.57□□□□□ -2
Scube1-202ENSMUST00000043634 Gm11567Q9D141 195 aa2.57□□□□□ -2
Scube1-202ENSMUST00000043634 A0A1Y7VJH8 109 aa2.55□□□□□ -2
Scube1-202ENSMUST00000043634 A030003K21RikA0A1Y7VIM3 128 aa2.39□□□□□ -2.03
Scube1-202ENSMUST00000043634 Gm6217A0A1Y7VJK9 128 aa2.24□□□□□ -2.05
Scube1-202ENSMUST00000043634 Gm45618A0A1B0GSA0 219 aa2.18□□□□□ -2.06
Scube1-202ENSMUST00000043634 Gm29735A0A1B0GT06 219 aa2.14□□□□□ -2.07
Scube1-202ENSMUST00000043634 Krtap28-10A0A1Y7VP58 119 aa2.12□□□□□ -2.07
Scube1-202ENSMUST00000043634 A030005K14RikA0A1Y7VNY1 122 aa2.07□□□□□ -2.08
Scube1-202ENSMUST00000043634 Krtap28-13A0A087WQP5 138 aa1.91□□□□□ -2.1
Scube1-202ENSMUST00000043634 Gm7544A0A1Y7VJ58 118 aa1.9□□□□□ -2.1
Scube1-202ENSMUST00000043634 A0A1Y7VJ07 166 aa1.77□□□□□ -2.13
Scube1-202ENSMUST00000043634 A0A286YCP9 139 aa1.71□□□□□ -2.13
Scube1-202ENSMUST00000043634 Krtap5-1Q64507 230 aa1.64□□□□□ -2.15
Scube1-202ENSMUST00000043634 A030014E15RikA0A1Y7VJV2 120 aa1.58□□□□□ -2.16
Scube1-202ENSMUST00000043634 Gm4559A4IF42 199 aa1.07□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 66.9 ms