RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Krtap4-1Q3UUY3 169 aa4.88□□□□□ -1.63
Usp38-201ENSMUST00000042724 Gm11596B1AQB0 205 aa4.83□□□□□ -1.64
Usp38-201ENSMUST00000042724 Gm11564A2A4L9 201 aa4.77□□□□□ -1.65
Usp38-201ENSMUST00000042724 Gm11563B1AQ90 168 aa4.77□□□□□ -1.65
Usp38-201ENSMUST00000042724 Gm11595B1AQA7 289 aa4.77□□□□□ -1.65
Usp38-201ENSMUST00000042724 Krtap4-8B1AQA8 209 aa4.77□□□□□ -1.65
Usp38-201ENSMUST00000042724 Krtap4-9B1AQA9 244 aa4.73□□□□□ -1.65
Usp38-201ENSMUST00000042724 SspoQ8CG65 4998 aa4.71□□□□□ -1.66
Usp38-201ENSMUST00000042724 Gm10024A0A0A0MQA4 119 aa4.69□□□□□ -1.66
Usp38-201ENSMUST00000042724 Sprr2eO70556 76 aa4.68□□□□□ -1.66
Usp38-201ENSMUST00000042724 Sprr2dO70555 85 aa4.66□□□□□ -1.66
Usp38-201ENSMUST00000042724 2300003K06RikA2A4M0 262 aa4.65□□□□□ -1.66
Usp38-201ENSMUST00000042724 Syne1Q6ZWR6 8799 aa4.62□□□□□ -1.67
Usp38-201ENSMUST00000042724 Krtap4-7Q9D732 168 aa4.59□□□□□ -1.67
Usp38-201ENSMUST00000042724 Fsip2A2ARZ3 6995 aa4.59□□□□□ -1.67
Usp38-201ENSMUST00000042724 Sprr2fO70557 76 aa4.59□□□□□ -1.68
Usp38-201ENSMUST00000042724 Krtap4-13Q9D7P3 165 aa4.58□□□□□ -1.68
Usp38-201ENSMUST00000042724 Gm11562A0PK51 136 aa4.58□□□□□ -1.68
Usp38-201ENSMUST00000042724 Gm11938Q9D3H4 131 aa4.58□□□□□ -1.68
Usp38-201ENSMUST00000042724 Syne2Q6ZWQ0 6874 aaKnown RBP4.56□□□□□ -1.68
Usp38-201ENSMUST00000042724 A0A1Y7VJH8 109 aa4.55□□□□□ -1.68
Usp38-201ENSMUST00000042724 A030003K21RikA0A1Y7VIM3 128 aa4.5□□□□□ -1.69
Usp38-201ENSMUST00000042724 Lce1kJ3QP15 125 aa4.48□□□□□ -1.69
Usp38-201ENSMUST00000042724 Krtap28-10A0A1Y7VP58 119 aa4.47□□□□□ -1.69
Usp38-201ENSMUST00000042724 Sprr2hO70559 108 aa4.4□□□□□ -1.7
Usp38-201ENSMUST00000042724 Krtap28-13A0A087WQP5 138 aa4.36□□□□□ -1.71
Usp38-201ENSMUST00000042724 Krtap31-1Q9D644 177 aa4.3□□□□□ -1.72
Usp38-201ENSMUST00000042724 Krtap6-3A0A087WQL6 57 aa4.29□□□□□ -1.72
Usp38-201ENSMUST00000042724 A030005K14RikA0A1Y7VNY1 122 aa4.26□□□□□ -1.73
Usp38-201ENSMUST00000042724 Mt3P28184 68 aa4.25□□□□□ -1.73
Usp38-201ENSMUST00000042724 Gm6217A0A1Y7VJK9 128 aa4.22□□□□□ -1.73
Usp38-201ENSMUST00000042724 A0A1Y7VJ07 166 aa4.2□□□□□ -1.74
Usp38-201ENSMUST00000042724 Lce1a1Q9CQH5 143 aa4.2□□□□□ -1.74
Usp38-201ENSMUST00000042724 A030005L19RikA0A1Y7VIU2 113 aa4.13□□□□□ -1.75
Usp38-201ENSMUST00000042724 Gm11555B1AQ89 175 aa4.11□□□□□ -1.75
Usp38-201ENSMUST00000042724 Mt1P02802 61 aaKnown RBP4.08□□□□□ -1.76
Usp38-201ENSMUST00000042724 Krtap20-2E9Q0A8 60 aa4.06□□□□□ -1.76
Usp38-201ENSMUST00000042724 Gm7544A0A1Y7VJ58 118 aa4.06□□□□□ -1.76
Usp38-201ENSMUST00000042724 Muc16A0A140LJ72 8478 aa4.04□□□□□ -1.76
Usp38-201ENSMUST00000042724 Gm11554B1AQB2 190 aa4□□□□□ -1.77
Usp38-201ENSMUST00000042724 ObscnA2AAJ9 8891 aaKnown RBP3.96□□□□□ -1.78
Usp38-201ENSMUST00000042724 Krtap4-16Q91W93 202 aa3.93□□□□□ -1.78
Usp38-201ENSMUST00000042724 Macf1Q9QXZ0 7354 aaKnown RBP3.87□□□□□ -1.79
Usp38-201ENSMUST00000042724 A030014E15RikA0A1Y7VJV2 120 aa3.85□□□□□ -1.79
Usp38-201ENSMUST00000042724 Eppk1Q8R0W0 6548 aa3.76□□□□□ -1.81
Usp38-201ENSMUST00000042724 Kmt2dQ6PDK2 5588 aa3.65□□□□□ -1.82
Usp38-201ENSMUST00000042724 DstQ91ZU6 7393 aaKnown RBP3.63□□□□□ -1.83
Usp38-201ENSMUST00000042724 NebE9Q1W3 7152 aa3.52□□□□□ -1.85
Usp38-201ENSMUST00000042724 Sprr2bO70554 98 aa3.49□□□□□ -1.85
Usp38-201ENSMUST00000042724 Gm11568A2A4M2 211 aa3.45□□□□□ -1.86
Usp38-201ENSMUST00000042724 Krtap9-1Q64526 186 aa3.45□□□□□ -1.86
Usp38-201ENSMUST00000042724 Gm11559Q9D3H7 191 aa3.41□□□□□ -1.86
Usp38-201ENSMUST00000042724 Muc19Q6PZE0 7524 aa3.32□□□□□ -1.88
Usp38-201ENSMUST00000042724 1110025L11RikO09048 78 aa3.32□□□□□ -1.88
Usp38-201ENSMUST00000042724 Krtap6-5Q925H3 78 aa3.32□□□□□ -1.88
Usp38-201ENSMUST00000042724 Krtap5-2Q9D5Z7 189 aa3.26□□□□□ -1.89
Usp38-201ENSMUST00000042724 Gpr98Q8VHN7 6298 aaKnown RBP3.2□□□□□ -1.9
Usp38-201ENSMUST00000042724 Gm11639A0A1D5RLM8 5808 aa3.18□□□□□ -1.9
Usp38-201ENSMUST00000042724 A0A286YCP9 139 aa3.15□□□□□ -1.9
Usp38-201ENSMUST00000042724 Krtap31-2Q8CAY5 177 aa3.11□□□□□ -1.91
Usp38-201ENSMUST00000042724 Hmcn1D3YXG0 5634 aa3.09□□□□□ -1.92
Usp38-201ENSMUST00000042724 Gm10229O08631 77 aa3.08□□□□□ -1.92
Usp38-201ENSMUST00000042724 Gm4553A0A1B0GSA9 284 aa3.06□□□□□ -1.92
Usp38-201ENSMUST00000042724 Gm2431E9Q8S1 172 aa2.88□□□□□ -1.95
Usp38-201ENSMUST00000042724 Gm10153A0A1B0GRL1 320 aa2.86□□□□□ -1.95
Usp38-201ENSMUST00000042724 AhnakE9Q616 5656 aaKnown RBP2.78□□□□□ -1.96
Usp38-201ENSMUST00000042724 Gm45337A0A1B0GS71 263 aa2.77□□□□□ -1.97
Usp38-201ENSMUST00000042724 Phgr1Q8K0G7 91 aa2.73□□□□□ -1.97
Usp38-201ENSMUST00000042724 Gm40460A0A1B0GR10 244 aa2.73□□□□□ -1.97
Usp38-201ENSMUST00000042724 Gm7579A0A1B0GRJ4 243 aa2.73□□□□□ -1.97
Usp38-201ENSMUST00000042724 Krtap5-5Q2TA51 241 aa2.73□□□□□ -1.97
Usp38-201ENSMUST00000042724 Krtap5-4Q62220 223 aa2.73□□□□□ -1.97
Usp38-201ENSMUST00000042724 Gm39115A0A1B0GSH7 232 aa2.53□□□□□ -2
Usp38-201ENSMUST00000042724 Krtap6-2O08884 159 aa2.53□□□□□ -2
Usp38-201ENSMUST00000042724 Krtap21-1Q925H4 128 aa2.44□□□□□ -2.02
Usp38-201ENSMUST00000042724 Gm11567Q9D141 195 aa2.22□□□□□ -2.05
Usp38-201ENSMUST00000042724 Gm45618A0A1B0GSA0 219 aa2.19□□□□□ -2.06
Usp38-201ENSMUST00000042724 Gm29735A0A1B0GT06 219 aa2.05□□□□□ -2.08
Usp38-201ENSMUST00000042724 Krtap5-1Q64507 230 aa1.5□□□□□ -2.17
Usp38-201ENSMUST00000042724 Gm4559A4IF42 199 aa1.3□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 109.3 ms