RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 2300003K06RikA2A4M0 262 aa3.2□□□□□ -1.9
Trim42-201ENSMUST00000035026 Sprr2kO70562 68 aa3.2□□□□□ -1.9
Trim42-201ENSMUST00000035026 Gm10272F7CZ33 110 aa3.18□□□□□ -1.9
Trim42-201ENSMUST00000035026 Krtap28-13A0A087WQP5 138 aa3.16□□□□□ -1.9
Trim42-201ENSMUST00000035026 Krtap4-7Q9D732 168 aa3.14□□□□□ -1.91
Trim42-201ENSMUST00000035026 Lce1lQ9D1G7 135 aa3.14□□□□□ -1.91
Trim42-201ENSMUST00000035026 A030005L19RikA0A1Y7VIU2 113 aa3.11□□□□□ -1.91
Trim42-201ENSMUST00000035026 A030005K14RikA0A1Y7VNY1 122 aa3.07□□□□□ -1.92
Trim42-201ENSMUST00000035026 Lce1hQ9D6R3 140 aa3.07□□□□□ -1.92
Trim42-201ENSMUST00000035026 Lce1dQ9D731 133 aa3.05□□□□□ -1.92
Trim42-201ENSMUST00000035026 Gm7544A0A1Y7VJ58 118 aa3.04□□□□□ -1.92
Trim42-201ENSMUST00000035026 Sprr2fO70557 76 aa3.01□□□□□ -1.93
Trim42-201ENSMUST00000035026 Sprr2gO70558 76 aa3.01□□□□□ -1.93
Trim42-201ENSMUST00000035026 Lce1a1Q9CQH5 143 aa2.97□□□□□ -1.93
Trim42-201ENSMUST00000035026 Gm11938Q9D3H4 131 aa2.97□□□□□ -1.93
Trim42-201ENSMUST00000035026 Krtap20-2E9Q0A8 60 aa2.97□□□□□ -1.93
Trim42-201ENSMUST00000035026 Krtap5-2Q9D5Z7 189 aa2.91□□□□□ -1.94
Trim42-201ENSMUST00000035026 Lce1eQ9D139 143 aa2.9□□□□□ -1.95
Trim42-201ENSMUST00000035026 Syne1Q6ZWR6 8799 aa2.88□□□□□ -1.95
Trim42-201ENSMUST00000035026 Lce1kJ3QP15 125 aa2.87□□□□□ -1.95
Trim42-201ENSMUST00000035026 Sprr2dO70555 85 aa2.86□□□□□ -1.95
Trim42-201ENSMUST00000035026 Lce3bQ9CQM7 98 aa2.86□□□□□ -1.95
Trim42-201ENSMUST00000035026 Gm10024A0A0A0MQA4 119 aa2.83□□□□□ -1.96
Trim42-201ENSMUST00000035026 Gm11568A2A4M2 211 aa2.81□□□□□ -1.96
Trim42-201ENSMUST00000035026 Krtap9-1Q64526 186 aa2.81□□□□□ -1.96
Trim42-201ENSMUST00000035026 Gm11559Q9D3H7 191 aa2.8□□□□□ -1.96
Trim42-201ENSMUST00000035026 Sprr2eO70556 76 aa2.78□□□□□ -1.96
Trim42-201ENSMUST00000035026 Gm4553A0A1B0GSA9 284 aa2.75□□□□□ -1.97
Trim42-201ENSMUST00000035026 A0A1Y7VJ07 166 aa2.75□□□□□ -1.97
Trim42-201ENSMUST00000035026 Eppk1Q8R0W0 6548 aa2.73□□□□□ -1.97
Trim42-201ENSMUST00000035026 A030003K21RikA0A1Y7VIM3 128 aa2.72□□□□□ -1.97
Trim42-201ENSMUST00000035026 Kmt2dQ6PDK2 5588 aa2.72□□□□□ -1.97
Trim42-201ENSMUST00000035026 Lce1fB9EJP6 147 aa2.71□□□□□ -1.97
Trim42-201ENSMUST00000035026 Lce1cQ9D1C5 147 aa2.71□□□□□ -1.97
Trim42-201ENSMUST00000035026 Gm11554B1AQB2 190 aa2.69□□□□□ -1.98
Trim42-201ENSMUST00000035026 Gm45337A0A1B0GS71 263 aa2.67□□□□□ -1.98
Trim42-201ENSMUST00000035026 Gm2431E9Q8S1 172 aa2.67□□□□□ -1.98
Trim42-201ENSMUST00000035026 Mt1P02802 61 aaKnown RBP2.66□□□□□ -1.98
Trim42-201ENSMUST00000035026 Macf1Q9QXZ0 7354 aaKnown RBP2.64□□□□□ -1.99
Trim42-201ENSMUST00000035026 Gm10153A0A1B0GRL1 320 aa2.64□□□□□ -1.99
Trim42-201ENSMUST00000035026 Krtap19-4Q925H7 84 aa2.63□□□□□ -1.99
Trim42-201ENSMUST00000035026 Gm10142J3KMP7 120 aa2.61□□□□□ -1.99
Trim42-201ENSMUST00000035026 A030014E15RikA0A1Y7VJV2 120 aa2.6□□□□□ -1.99
Trim42-201ENSMUST00000035026 Gm10100J3QK64 120 aa2.6□□□□□ -1.99
Trim42-201ENSMUST00000035026 Lce3cQ91V05 98 aa2.59□□□□□ -2
Trim42-201ENSMUST00000035026 Gm11639A0A1D5RLM8 5808 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 Gm40460A0A1B0GR10 244 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 Gm7579A0A1B0GRJ4 243 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 Krtap5-5Q2TA51 241 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 Krtap5-4Q62220 223 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 A0A286YCP9 139 aa2.58□□□□□ -2
Trim42-201ENSMUST00000035026 Gm6217A0A1Y7VJK9 128 aa2.57□□□□□ -2
Trim42-201ENSMUST00000035026 Hmcn1D3YXG0 5634 aa2.56□□□□□ -2
Trim42-201ENSMUST00000035026 Lce3dE9Q8V1 98 aa2.56□□□□□ -2
Trim42-201ENSMUST00000035026 Krtap4-16Q91W93 202 aa2.56□□□□□ -2
Trim42-201ENSMUST00000035026 Sprr2hO70559 108 aa2.56□□□□□ -2
Trim42-201ENSMUST00000035026 Gm39115A0A1B0GSH7 232 aa2.5□□□□□ -2.01
Trim42-201ENSMUST00000035026 ObscnA2AAJ9 8891 aaKnown RBP2.5□□□□□ -2.01
Trim42-201ENSMUST00000035026 Lce3eF8VQJ0 98 aa2.49□□□□□ -2.01
Trim42-201ENSMUST00000035026 Lce3fQ6PAI4 98 aa2.49□□□□□ -2.01
Trim42-201ENSMUST00000035026 Muc19Q6PZE0 7524 aa2.45□□□□□ -2.02
Trim42-201ENSMUST00000035026 Mt3P28184 68 aa2.43□□□□□ -2.02
Trim42-201ENSMUST00000035026 Lce3aQ497I5 98 aa2.43□□□□□ -2.02
Trim42-201ENSMUST00000035026 Gpr98Q8VHN7 6298 aaKnown RBP2.38□□□□□ -2.03
Trim42-201ENSMUST00000035026 DstQ91ZU6 7393 aaKnown RBP2.37□□□□□ -2.03
Trim42-201ENSMUST00000035026 AhnakE9Q616 5656 aaKnown RBP2.32□□□□□ -2.04
Trim42-201ENSMUST00000035026 Gm45618A0A1B0GSA0 219 aa2.3□□□□□ -2.04
Trim42-201ENSMUST00000035026 NebE9Q1W3 7152 aa2.26□□□□□ -2.05
Trim42-201ENSMUST00000035026 Muc16A0A140LJ72 8478 aa2.03□□□□□ -2.08
Trim42-201ENSMUST00000035026 1110025L11RikO09048 78 aa1.93□□□□□ -2.1
Trim42-201ENSMUST00000035026 Krtap6-5Q925H3 78 aa1.93□□□□□ -2.1
Trim42-201ENSMUST00000035026 Gm29735A0A1B0GT06 219 aa1.91□□□□□ -2.1
Trim42-201ENSMUST00000035026 Gm11567Q9D141 195 aa1.81□□□□□ -2.12
Trim42-201ENSMUST00000035026 Gm10229O08631 77 aa1.73□□□□□ -2.13
Trim42-201ENSMUST00000035026 Sprr2bO70554 98 aa1.68□□□□□ -2.14
Trim42-201ENSMUST00000035026 Krtap21-1Q925H4 128 aa1.57□□□□□ -2.16
Trim42-201ENSMUST00000035026 Phgr1Q8K0G7 91 aa1.52□□□□□ -2.17
Trim42-201ENSMUST00000035026 Krtap6-2O08884 159 aa1.52□□□□□ -2.17
Trim42-201ENSMUST00000035026 Krtap5-1Q64507 230 aa1.38□□□□□ -2.19
Trim42-201ENSMUST00000035026 Gm4559A4IF42 199 aa1.28□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 182.4 ms