RNA–Protein interactions for RNA: ENSMUST00000034879.4

Hmg20a-201, Transcript of High mobility group protein 20A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmg20a, Length 3,778 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20a-201ENSMUST00000034879 Syne1Q6ZWR6 8799 aa2.6□□□□□ -1.99
Hmg20a-201ENSMUST00000034879 A030005L19RikA0A1Y7VIU2 113 aa2.59□□□□□ -1.99
Hmg20a-201ENSMUST00000034879 Syne2Q6ZWQ0 6874 aaKnown RBP2.59□□□□□ -1.99
Hmg20a-201ENSMUST00000034879 Krtap4-9B1AQA9 244 aa2.54□□□□□ -2
Hmg20a-201ENSMUST00000034879 Gm10100J3QK64 120 aa2.53□□□□□ -2
Hmg20a-201ENSMUST00000034879 Lce1dQ9D731 133 aa2.52□□□□□ -2.01
Hmg20a-201ENSMUST00000034879 Mt4P47945 62 aa2.51□□□□□ -2.01
Hmg20a-201ENSMUST00000034879 Lce3bQ9CQM7 98 aa2.49□□□□□ -2.01
Hmg20a-201ENSMUST00000034879 Sprr2gO70558 76 aa2.48□□□□□ -2.01
Hmg20a-201ENSMUST00000034879 Muc16A0A140LJ72 8478 aa2.45□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Gm10142J3KMP7 120 aa2.45□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 2300003K06RikA2A4M0 262 aa2.43□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Krtap6-3A0A087WQL6 57 aa2.43□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 A0A1Y7VJ07 166 aa2.43□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Gm11938Q9D3H4 131 aa2.43□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Krtap4-13Q9D7P3 165 aa2.42□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Gm7544A0A1Y7VJ58 118 aa2.41□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Sprr2kO70562 68 aa2.41□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Lce3cQ91V05 98 aa2.41□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Fsip2A2ARZ3 6995 aa2.4□□□□□ -2.02
Hmg20a-201ENSMUST00000034879 Lce1a1Q9CQH5 143 aa2.39□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 Lce3eF8VQJ0 98 aa2.37□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 Lce3fQ6PAI4 98 aa2.37□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 Lce3dE9Q8V1 98 aa2.37□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 Lce1cQ9D1C5 147 aa2.37□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 Sprr2dO70555 85 aa2.35□□□□□ -2.03
Hmg20a-201ENSMUST00000034879 A030014E15RikA0A1Y7VJV2 120 aa2.33□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Lce1lQ9D1G7 135 aa2.32□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Krtap19-4Q925H7 84 aa2.3□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Sprr2iO70560 76 aa2.29□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Krtap5-2Q9D5Z7 189 aa2.29□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Lce1fB9EJP6 147 aa2.28□□□□□ -2.04
Hmg20a-201ENSMUST00000034879 Lce3aQ497I5 98 aa2.27□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 A030003K21RikA0A1Y7VIM3 128 aa2.27□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 Krtap20-2E9Q0A8 60 aa2.23□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 Lce1kJ3QP15 125 aa2.23□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 Gm10024A0A0A0MQA4 119 aa2.23□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 ObscnA2AAJ9 8891 aaKnown RBP2.23□□□□□ -2.05
Hmg20a-201ENSMUST00000034879 Mt1P02802 61 aaKnown RBP2.2□□□□□ -2.06
Hmg20a-201ENSMUST00000034879 Gm11568A2A4M2 211 aa2.19□□□□□ -2.06
Hmg20a-201ENSMUST00000034879 Krtap9-1Q64526 186 aa2.19□□□□□ -2.06
Hmg20a-201ENSMUST00000034879 Sprr2fO70557 76 aa2.18□□□□□ -2.06
Hmg20a-201ENSMUST00000034879 Gm4553A0A1B0GSA9 284 aa2.14□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Macf1Q9QXZ0 7354 aaKnown RBP2.14□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Sprr2hO70559 108 aa2.13□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Gm6217A0A1Y7VJK9 128 aa2.13□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Krtap4-16Q91W93 202 aa2.13□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Gm45337A0A1B0GS71 263 aa2.11□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Gm10153A0A1B0GRL1 320 aa2.11□□□□□ -2.07
Hmg20a-201ENSMUST00000034879 Gm40460A0A1B0GR10 244 aa2.06□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Gm7579A0A1B0GRJ4 243 aa2.06□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Krtap5-5Q2TA51 241 aa2.06□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Krtap5-4Q62220 223 aa2.06□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Sprr2eO70556 76 aa2.05□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Gm2431E9Q8S1 172 aa2.03□□□□□ -2.08
Hmg20a-201ENSMUST00000034879 Mt3P28184 68 aa2.01□□□□□ -2.09
Hmg20a-201ENSMUST00000034879 Muc19Q6PZE0 7524 aa1.97□□□□□ -2.09
Hmg20a-201ENSMUST00000034879 Kmt2dQ6PDK2 5588 aa1.96□□□□□ -2.1
Hmg20a-201ENSMUST00000034879 Gm39115A0A1B0GSH7 232 aa1.95□□□□□ -2.1
Hmg20a-201ENSMUST00000034879 Gm11554B1AQB2 190 aa1.95□□□□□ -2.1
Hmg20a-201ENSMUST00000034879 Eppk1Q8R0W0 6548 aa1.89□□□□□ -2.11
Hmg20a-201ENSMUST00000034879 DstQ91ZU6 7393 aaKnown RBP1.85□□□□□ -2.11
Hmg20a-201ENSMUST00000034879 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.11
Hmg20a-201ENSMUST00000034879 NebE9Q1W3 7152 aa1.83□□□□□ -2.12
Hmg20a-201ENSMUST00000034879 A0A286YCP9 139 aa1.8□□□□□ -2.12
Hmg20a-201ENSMUST00000034879 Gm45618A0A1B0GSA0 219 aa1.76□□□□□ -2.13
Hmg20a-201ENSMUST00000034879 Gm11639A0A1D5RLM8 5808 aa1.68□□□□□ -2.14
Hmg20a-201ENSMUST00000034879 AhnakE9Q616 5656 aaKnown RBP1.65□□□□□ -2.14
Hmg20a-201ENSMUST00000034879 Gpr98Q8VHN7 6298 aaKnown RBP1.65□□□□□ -2.15
Hmg20a-201ENSMUST00000034879 1110025L11RikO09048 78 aa1.65□□□□□ -2.15
Hmg20a-201ENSMUST00000034879 Krtap6-5Q925H3 78 aa1.65□□□□□ -2.15
Hmg20a-201ENSMUST00000034879 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Hmg20a-201ENSMUST00000034879 Gm11567Q9D141 195 aa1.53□□□□□ -2.16
Hmg20a-201ENSMUST00000034879 Sprr2bO70554 98 aa1.5□□□□□ -2.17
Hmg20a-201ENSMUST00000034879 Gm10229O08631 77 aa1.47□□□□□ -2.17
Hmg20a-201ENSMUST00000034879 Phgr1Q8K0G7 91 aa1.35□□□□□ -2.19
Hmg20a-201ENSMUST00000034879 Krtap21-1Q925H4 128 aa1.35□□□□□ -2.19
Hmg20a-201ENSMUST00000034879 Krtap6-2O08884 159 aa1.26□□□□□ -2.21
Hmg20a-201ENSMUST00000034879 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Hmg20a-201ENSMUST00000034879 Krtap5-1Q64507 230 aa0.99□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 185.1 ms