RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Gm11938Q9D3H4 131 aa5.55□□□□□ -1.52
Usb1-201ENSMUST00000034245 Lce1dQ9D731 133 aa5.54□□□□□ -1.52
Usb1-201ENSMUST00000034245 Sprr2gO70558 76 aa5.47□□□□□ -1.53
Usb1-201ENSMUST00000034245 Sprr2iO70560 76 aa5.42□□□□□ -1.54
Usb1-201ENSMUST00000034245 Syne1Q6ZWR6 8799 aa5.41□□□□□ -1.54
Usb1-201ENSMUST00000034245 Gm9112A2AI92 75 aa5.38□□□□□ -1.55
Usb1-201ENSMUST00000034245 Sprr2dO70555 85 aa5.38□□□□□ -1.55
Usb1-201ENSMUST00000034245 Lce1kJ3QP15 125 aa5.36□□□□□ -1.55
Usb1-201ENSMUST00000034245 Krtap28-10A0A1Y7VP58 119 aa5.3□□□□□ -1.56
Usb1-201ENSMUST00000034245 Krtap20-2E9Q0A8 60 aa5.29□□□□□ -1.56
Usb1-201ENSMUST00000034245 Krtap5-2Q9D5Z7 189 aa5.26□□□□□ -1.57
Usb1-201ENSMUST00000034245 Lce1eQ9D139 143 aa5.24□□□□□ -1.57
Usb1-201ENSMUST00000034245 Lce1a1Q9CQH5 143 aa5.24□□□□□ -1.57
Usb1-201ENSMUST00000034245 4933428G20RikQ9D3X4 101 aa5.24□□□□□ -1.57
Usb1-201ENSMUST00000034245 Krtap19-4Q925H7 84 aa5.22□□□□□ -1.57
Usb1-201ENSMUST00000034245 Lce1fB9EJP6 147 aa5.21□□□□□ -1.58
Usb1-201ENSMUST00000034245 Lce1cQ9D1C5 147 aa5.21□□□□□ -1.58
Usb1-201ENSMUST00000034245 Lce3cQ91V05 98 aa5.2□□□□□ -1.58
Usb1-201ENSMUST00000034245 A0A1Y7VLE6 161 aa5.16□□□□□ -1.58
Usb1-201ENSMUST00000034245 Gm11568A2A4M2 211 aa5.16□□□□□ -1.58
Usb1-201ENSMUST00000034245 Krtap9-1Q64526 186 aa5.16□□□□□ -1.58
Usb1-201ENSMUST00000034245 Lce3dE9Q8V1 98 aa5.12□□□□□ -1.59
Usb1-201ENSMUST00000034245 Mt1P02802 61 aaKnown RBP5.12□□□□□ -1.59
Usb1-201ENSMUST00000034245 Gm7544A0A1Y7VJ58 118 aa5.08□□□□□ -1.6
Usb1-201ENSMUST00000034245 Lce3eF8VQJ0 98 aa5.06□□□□□ -1.6
Usb1-201ENSMUST00000034245 Lce3fQ6PAI4 98 aa5.06□□□□□ -1.6
Usb1-201ENSMUST00000034245 Krtap28-13A0A087WQP5 138 aa5.05□□□□□ -1.6
Usb1-201ENSMUST00000034245 Eppk1Q8R0W0 6548 aa5.01□□□□□ -1.61
Usb1-201ENSMUST00000034245 Gm11559Q9D3H7 191 aa4.96□□□□□ -1.61
Usb1-201ENSMUST00000034245 A030005L19RikA0A1Y7VIU2 113 aa4.95□□□□□ -1.62
Usb1-201ENSMUST00000034245 Gm4553A0A1B0GSA9 284 aa4.93□□□□□ -1.62
Usb1-201ENSMUST00000034245 Gm10100J3QK64 120 aa4.91□□□□□ -1.62
Usb1-201ENSMUST00000034245 A030005K14RikA0A1Y7VNY1 122 aa4.91□□□□□ -1.62
Usb1-201ENSMUST00000034245 Gm11639A0A1D5RLM8 5808 aa4.9□□□□□ -1.62
Usb1-201ENSMUST00000034245 Gm10153A0A1B0GRL1 320 aa4.86□□□□□ -1.63
Usb1-201ENSMUST00000034245 Lce3aQ497I5 98 aa4.86□□□□□ -1.63
Usb1-201ENSMUST00000034245 ObscnA2AAJ9 8891 aaKnown RBP4.84□□□□□ -1.64
Usb1-201ENSMUST00000034245 Gm45337A0A1B0GS71 263 aa4.82□□□□□ -1.64
Usb1-201ENSMUST00000034245 Gpr98Q8VHN7 6298 aaKnown RBP4.79□□□□□ -1.64
Usb1-201ENSMUST00000034245 Gm11554B1AQB2 190 aa4.79□□□□□ -1.64
Usb1-201ENSMUST00000034245 Gm10142J3KMP7 120 aa4.79□□□□□ -1.64
Usb1-201ENSMUST00000034245 Krtap31-2Q8CAY5 177 aa4.79□□□□□ -1.64
Usb1-201ENSMUST00000034245 Macf1Q9QXZ0 7354 aaKnown RBP4.76□□□□□ -1.65
Usb1-201ENSMUST00000034245 Gm2431E9Q8S1 172 aa4.74□□□□□ -1.65
Usb1-201ENSMUST00000034245 Mt3P28184 68 aa4.68□□□□□ -1.66
Usb1-201ENSMUST00000034245 Gm40460A0A1B0GR10 244 aa4.67□□□□□ -1.66
Usb1-201ENSMUST00000034245 Gm7579A0A1B0GRJ4 243 aa4.67□□□□□ -1.66
Usb1-201ENSMUST00000034245 Krtap5-5Q2TA51 241 aa4.67□□□□□ -1.66
Usb1-201ENSMUST00000034245 Krtap5-4Q62220 223 aa4.67□□□□□ -1.66
Usb1-201ENSMUST00000034245 Sprr2hO70559 108 aa4.66□□□□□ -1.66
Usb1-201ENSMUST00000034245 Kmt2dQ6PDK2 5588 aa4.59□□□□□ -1.67
Usb1-201ENSMUST00000034245 Krtap31-1Q9D644 177 aa4.55□□□□□ -1.68
Usb1-201ENSMUST00000034245 Muc19Q6PZE0 7524 aa4.54□□□□□ -1.68
Usb1-201ENSMUST00000034245 Hmcn1D3YXG0 5634 aa4.54□□□□□ -1.68
Usb1-201ENSMUST00000034245 A0A286YCP9 139 aa4.49□□□□□ -1.69
Usb1-201ENSMUST00000034245 Sprr2eO70556 76 aa4.49□□□□□ -1.69
Usb1-201ENSMUST00000034245 A030003K21RikA0A1Y7VIM3 128 aa4.48□□□□□ -1.69
Usb1-201ENSMUST00000034245 Gm39115A0A1B0GSH7 232 aa4.44□□□□□ -1.7
Usb1-201ENSMUST00000034245 A0A1Y7VJ07 166 aa4.42□□□□□ -1.7
Usb1-201ENSMUST00000034245 Gm6217A0A1Y7VJK9 128 aa4.38□□□□□ -1.71
Usb1-201ENSMUST00000034245 DstQ91ZU6 7393 aaKnown RBP4.28□□□□□ -1.72
Usb1-201ENSMUST00000034245 NebE9Q1W3 7152 aa4.25□□□□□ -1.73
Usb1-201ENSMUST00000034245 Sprr2fO70557 76 aa4.23□□□□□ -1.73
Usb1-201ENSMUST00000034245 A030014E15RikA0A1Y7VJV2 120 aa4.17□□□□□ -1.74
Usb1-201ENSMUST00000034245 Gm10024A0A0A0MQA4 119 aa4.11□□□□□ -1.75
Usb1-201ENSMUST00000034245 Gm45618A0A1B0GSA0 219 aa3.99□□□□□ -1.77
Usb1-201ENSMUST00000034245 Krtap4-16Q91W93 202 aa3.98□□□□□ -1.77
Usb1-201ENSMUST00000034245 AhnakE9Q616 5656 aaKnown RBP3.87□□□□□ -1.79
Usb1-201ENSMUST00000034245 1110025L11RikO09048 78 aa3.81□□□□□ -1.8
Usb1-201ENSMUST00000034245 Krtap6-5Q925H3 78 aa3.81□□□□□ -1.8
Usb1-201ENSMUST00000034245 Muc16A0A140LJ72 8478 aa3.57□□□□□ -1.84
Usb1-201ENSMUST00000034245 Gm29735A0A1B0GT06 219 aa3.49□□□□□ -1.85
Usb1-201ENSMUST00000034245 Gm10229O08631 77 aa3.4□□□□□ -1.86
Usb1-201ENSMUST00000034245 Gm11567Q9D141 195 aa3.37□□□□□ -1.87
Usb1-201ENSMUST00000034245 Sprr2bO70554 98 aa3.29□□□□□ -1.88
Usb1-201ENSMUST00000034245 Krtap21-1Q925H4 128 aa3.1□□□□□ -1.91
Usb1-201ENSMUST00000034245 Krtap6-2O08884 159 aa2.95□□□□□ -1.94
Usb1-201ENSMUST00000034245 Phgr1Q8K0G7 91 aa2.76□□□□□ -1.97
Usb1-201ENSMUST00000034245 Krtap5-1Q64507 230 aa2.46□□□□□ -2.02
Usb1-201ENSMUST00000034245 Gm4559A4IF42 199 aa2.08□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 936.5 ms