RNA–Protein interactions for RNA: ENSMUST00000033689.2

Cdx4-201, Transcript of Homeobox protein CDX-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx4, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4-201ENSMUST00000033689 Krtap4-8B1AQA8 209 aa5.22□□□□□ -1.57
Cdx4-201ENSMUST00000033689 2310046K23RikA0A0A6YVW6 87 aa5.14□□□□□ -1.59
Cdx4-201ENSMUST00000033689 A0A286YCP9 139 aa5.13□□□□□ -1.59
Cdx4-201ENSMUST00000033689 Krtap4-9B1AQA9 244 aa5.07□□□□□ -1.6
Cdx4-201ENSMUST00000033689 Mt4P47945 62 aa5.06□□□□□ -1.6
Cdx4-201ENSMUST00000033689 Lce1bQ9D149 137 aa5.04□□□□□ -1.6
Cdx4-201ENSMUST00000033689 Gm10272F7CZ33 110 aa4.96□□□□□ -1.62
Cdx4-201ENSMUST00000033689 Fsip2A2ARZ3 6995 aa4.95□□□□□ -1.62
Cdx4-201ENSMUST00000033689 Lce1lQ9D1G7 135 aa4.93□□□□□ -1.62
Cdx4-201ENSMUST00000033689 Krtap4-13Q9D7P3 165 aa4.88□□□□□ -1.63
Cdx4-201ENSMUST00000033689 Krtap31-1Q9D644 177 aa4.87□□□□□ -1.63
Cdx4-201ENSMUST00000033689 2300003K06RikA2A4M0 262 aa4.82□□□□□ -1.64
Cdx4-201ENSMUST00000033689 Gm11938Q9D3H4 131 aa4.77□□□□□ -1.65
Cdx4-201ENSMUST00000033689 Sprr2kO70562 68 aa4.76□□□□□ -1.65
Cdx4-201ENSMUST00000033689 Syne1Q6ZWR6 8799 aa4.7□□□□□ -1.66
Cdx4-201ENSMUST00000033689 Krtap31-2Q8CAY5 177 aa4.7□□□□□ -1.66
Cdx4-201ENSMUST00000033689 Lce3bQ9CQM7 98 aa4.68□□□□□ -1.66
Cdx4-201ENSMUST00000033689 Krtap6-3A0A087WQL6 57 aa4.67□□□□□ -1.66
Cdx4-201ENSMUST00000033689 Sprr2dO70555 85 aa4.63□□□□□ -1.67
Cdx4-201ENSMUST00000033689 Sprr2gO70558 76 aa4.63□□□□□ -1.67
Cdx4-201ENSMUST00000033689 Lce1eQ9D139 143 aa4.54□□□□□ -1.68
Cdx4-201ENSMUST00000033689 Lce1kJ3QP15 125 aa4.49□□□□□ -1.69
Cdx4-201ENSMUST00000033689 Sprr2iO70560 76 aa4.47□□□□□ -1.69
Cdx4-201ENSMUST00000033689 Krtap19-4Q925H7 84 aa4.47□□□□□ -1.69
Cdx4-201ENSMUST00000033689 Lce1cQ9D1C5 147 aa4.47□□□□□ -1.69
Cdx4-201ENSMUST00000033689 Krtap5-2Q9D5Z7 189 aa4.44□□□□□ -1.7
Cdx4-201ENSMUST00000033689 Krtap20-2E9Q0A8 60 aa4.44□□□□□ -1.7
Cdx4-201ENSMUST00000033689 Gm11568A2A4M2 211 aa4.38□□□□□ -1.71
Cdx4-201ENSMUST00000033689 Krtap9-1Q64526 186 aa4.38□□□□□ -1.71
Cdx4-201ENSMUST00000033689 Lce3cQ91V05 98 aa4.36□□□□□ -1.71
Cdx4-201ENSMUST00000033689 Lce1fB9EJP6 147 aa4.35□□□□□ -1.71
Cdx4-201ENSMUST00000033689 Mt1P02802 61 aaKnown RBP4.34□□□□□ -1.71
Cdx4-201ENSMUST00000033689 4933428G20RikQ9D3X4 101 aa4.33□□□□□ -1.72
Cdx4-201ENSMUST00000033689 Lce3dE9Q8V1 98 aa4.3□□□□□ -1.72
Cdx4-201ENSMUST00000033689 Lce3eF8VQJ0 98 aa4.27□□□□□ -1.73
Cdx4-201ENSMUST00000033689 Lce3fQ6PAI4 98 aa4.27□□□□□ -1.73
Cdx4-201ENSMUST00000033689 ObscnA2AAJ9 8891 aaKnown RBP4.23□□□□□ -1.73
Cdx4-201ENSMUST00000033689 Gm10100J3QK64 120 aa4.2□□□□□ -1.74
Cdx4-201ENSMUST00000033689 Gm10153A0A1B0GRL1 320 aa4.15□□□□□ -1.74
Cdx4-201ENSMUST00000033689 Gm4553A0A1B0GSA9 284 aa4.14□□□□□ -1.75
Cdx4-201ENSMUST00000033689 Gm11559Q9D3H7 191 aa4.14□□□□□ -1.75
Cdx4-201ENSMUST00000033689 Lce3aQ497I5 98 aa4.09□□□□□ -1.75
Cdx4-201ENSMUST00000033689 Gm10142J3KMP7 120 aa4.09□□□□□ -1.76
Cdx4-201ENSMUST00000033689 Gm45337A0A1B0GS71 263 aa4.07□□□□□ -1.76
Cdx4-201ENSMUST00000033689 Sprr2hO70559 108 aa4.02□□□□□ -1.77
Cdx4-201ENSMUST00000033689 Macf1Q9QXZ0 7354 aaKnown RBP4.01□□□□□ -1.77
Cdx4-201ENSMUST00000033689 Gm45618A0A1B0GSA0 219 aa4.01□□□□□ -1.77
Cdx4-201ENSMUST00000033689 Gm2431E9Q8S1 172 aa4□□□□□ -1.77
Cdx4-201ENSMUST00000033689 Gm11554B1AQB2 190 aa3.96□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Gm40460A0A1B0GR10 244 aa3.95□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Gm7579A0A1B0GRJ4 243 aa3.95□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Krtap5-5Q2TA51 241 aa3.95□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Krtap5-4Q62220 223 aa3.95□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Gm39115A0A1B0GSH7 232 aa3.92□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Mt3P28184 68 aa3.91□□□□□ -1.78
Cdx4-201ENSMUST00000033689 Gm11567Q9D141 195 aa3.89□□□□□ -1.79
Cdx4-201ENSMUST00000033689 Kmt2dQ6PDK2 5588 aa3.88□□□□□ -1.79
Cdx4-201ENSMUST00000033689 Hmcn1D3YXG0 5634 aa3.87□□□□□ -1.79
Cdx4-201ENSMUST00000033689 Gm29735A0A1B0GT06 219 aa3.76□□□□□ -1.81
Cdx4-201ENSMUST00000033689 Sprr2eO70556 76 aa3.75□□□□□ -1.81
Cdx4-201ENSMUST00000033689 Eppk1Q8R0W0 6548 aa3.69□□□□□ -1.82
Cdx4-201ENSMUST00000033689 Sprr2fO70557 76 aa3.59□□□□□ -1.83
Cdx4-201ENSMUST00000033689 DstQ91ZU6 7393 aaKnown RBP3.53□□□□□ -1.84
Cdx4-201ENSMUST00000033689 Muc19Q6PZE0 7524 aa3.5□□□□□ -1.85
Cdx4-201ENSMUST00000033689 Gm11639A0A1D5RLM8 5808 aa3.47□□□□□ -1.85
Cdx4-201ENSMUST00000033689 Gm10024A0A0A0MQA4 119 aa3.47□□□□□ -1.85
Cdx4-201ENSMUST00000033689 AhnakE9Q616 5656 aaKnown RBP3.32□□□□□ -1.88
Cdx4-201ENSMUST00000033689 1110025L11RikO09048 78 aa3.24□□□□□ -1.89
Cdx4-201ENSMUST00000033689 Krtap6-5Q925H3 78 aa3.24□□□□□ -1.89
Cdx4-201ENSMUST00000033689 Gpr98Q8VHN7 6298 aaKnown RBP3.23□□□□□ -1.89
Cdx4-201ENSMUST00000033689 Krtap4-16Q91W93 202 aa3.23□□□□□ -1.89
Cdx4-201ENSMUST00000033689 NebE9Q1W3 7152 aa3.22□□□□□ -1.89
Cdx4-201ENSMUST00000033689 Muc16A0A140LJ72 8478 aa3.11□□□□□ -1.91
Cdx4-201ENSMUST00000033689 Gm10229O08631 77 aa2.87□□□□□ -1.95
Cdx4-201ENSMUST00000033689 Sprr2bO70554 98 aa2.78□□□□□ -1.97
Cdx4-201ENSMUST00000033689 Krtap5-1Q64507 230 aa2.72□□□□□ -1.97
Cdx4-201ENSMUST00000033689 Krtap21-1Q925H4 128 aa2.65□□□□□ -1.98
Cdx4-201ENSMUST00000033689 Gm4559A4IF42 199 aa2.65□□□□□ -1.99
Cdx4-201ENSMUST00000033689 Krtap6-2O08884 159 aa2.49□□□□□ -2.01
Cdx4-201ENSMUST00000033689 Phgr1Q8K0G7 91 aa2.38□□□□□ -2.03
Retrieved 80 of 22,080 RNA–protein pairs in 101.1 ms