RNA–Protein interactions for RNA: ENSMUST00000031598.10

Ddx54-201, Transcript of ATP-dependent RNA helicase DDX54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx54, Length 4,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54-201ENSMUST00000031598 Krtap4-1Q3UUY3 169 aa3.6□□□□□ -1.83
Ddx54-201ENSMUST00000031598 Sprr2fO70557 76 aa3.57□□□□□ -1.84
Ddx54-201ENSMUST00000031598 Gm11596B1AQB0 205 aa3.57□□□□□ -1.84
Ddx54-201ENSMUST00000031598 Sprr2dO70555 85 aa3.56□□□□□ -1.84
Ddx54-201ENSMUST00000031598 Syne2Q6ZWQ0 6874 aaKnown RBP3.55□□□□□ -1.84
Ddx54-201ENSMUST00000031598 Lce3aQ497I5 98 aa3.54□□□□□ -1.84
Ddx54-201ENSMUST00000031598 Lce1lQ9D1G7 135 aa3.52□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Gm11564A2A4L9 201 aa3.51□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Gm11563B1AQ90 168 aa3.51□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Gm11595B1AQA7 289 aa3.51□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Krtap4-8B1AQA8 209 aa3.51□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Lce1eQ9D139 143 aa3.49□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Krtap4-9B1AQA9 244 aa3.48□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Krtap19-4Q925H7 84 aa3.46□□□□□ -1.85
Ddx54-201ENSMUST00000031598 Lce1bQ9D149 137 aa3.43□□□□□ -1.86
Ddx54-201ENSMUST00000031598 Lce1fB9EJP6 147 aa3.42□□□□□ -1.86
Ddx54-201ENSMUST00000031598 Lce1cQ9D1C5 147 aa3.42□□□□□ -1.86
Ddx54-201ENSMUST00000031598 Krtap4-13Q9D7P3 165 aa3.39□□□□□ -1.87
Ddx54-201ENSMUST00000031598 Gm11562A0PK51 136 aa3.38□□□□□ -1.87
Ddx54-201ENSMUST00000031598 Gm10024A0A0A0MQA4 119 aa3.35□□□□□ -1.87
Ddx54-201ENSMUST00000031598 2300003K06RikA2A4M0 262 aa3.35□□□□□ -1.87
Ddx54-201ENSMUST00000031598 Krtap4-16Q91W93 202 aa3.34□□□□□ -1.87
Ddx54-201ENSMUST00000031598 Sprr2eO70556 76 aa3.31□□□□□ -1.88
Ddx54-201ENSMUST00000031598 DstQ91ZU6 7393 aaKnown RBP3.3□□□□□ -1.88
Ddx54-201ENSMUST00000031598 Sprr2hO70559 108 aa3.3□□□□□ -1.88
Ddx54-201ENSMUST00000031598 Krtap4-7Q9D732 168 aa3.29□□□□□ -1.88
Ddx54-201ENSMUST00000031598 Lce1a1Q9CQH5 143 aa3.26□□□□□ -1.89
Ddx54-201ENSMUST00000031598 ObscnA2AAJ9 8891 aaKnown RBP3.25□□□□□ -1.89
Ddx54-201ENSMUST00000031598 Gm11555B1AQ89 175 aa3.2□□□□□ -1.9
Ddx54-201ENSMUST00000031598 NebE9Q1W3 7152 aa3.17□□□□□ -1.9
Ddx54-201ENSMUST00000031598 Lce1kJ3QP15 125 aa3.15□□□□□ -1.91
Ddx54-201ENSMUST00000031598 Krtap6-3A0A087WQL6 57 aa3.05□□□□□ -1.92
Ddx54-201ENSMUST00000031598 Gm11554B1AQB2 190 aa2.99□□□□□ -1.93
Ddx54-201ENSMUST00000031598 Muc19Q6PZE0 7524 aa2.98□□□□□ -1.93
Ddx54-201ENSMUST00000031598 Krtap20-2E9Q0A8 60 aa2.97□□□□□ -1.93
Ddx54-201ENSMUST00000031598 Mt1P02802 61 aaKnown RBP2.94□□□□□ -1.94
Ddx54-201ENSMUST00000031598 Mt3P28184 68 aa2.83□□□□□ -1.96
Ddx54-201ENSMUST00000031598 Eppk1Q8R0W0 6548 aa2.81□□□□□ -1.96
Ddx54-201ENSMUST00000031598 Gpr98Q8VHN7 6298 aaKnown RBP2.73□□□□□ -1.97
Ddx54-201ENSMUST00000031598 Kmt2dQ6PDK2 5588 aa2.73□□□□□ -1.97
Ddx54-201ENSMUST00000031598 Gm11568A2A4M2 211 aa2.64□□□□□ -1.99
Ddx54-201ENSMUST00000031598 Krtap9-1Q64526 186 aa2.64□□□□□ -1.99
Ddx54-201ENSMUST00000031598 Gm11639A0A1D5RLM8 5808 aa2.63□□□□□ -1.99
Ddx54-201ENSMUST00000031598 Sprr2bO70554 98 aa2.52□□□□□ -2.01
Ddx54-201ENSMUST00000031598 Gm11559Q9D3H7 191 aa2.51□□□□□ -2.01
Ddx54-201ENSMUST00000031598 Hmcn1D3YXG0 5634 aa2.46□□□□□ -2.02
Ddx54-201ENSMUST00000031598 Krtap5-2Q9D5Z7 189 aa2.42□□□□□ -2.02
Ddx54-201ENSMUST00000031598 1110025L11RikO09048 78 aa2.34□□□□□ -2.04
Ddx54-201ENSMUST00000031598 Krtap6-5Q925H3 78 aa2.34□□□□□ -2.04
Ddx54-201ENSMUST00000031598 A0A1Y7VJH8 109 aa2.3□□□□□ -2.04
Ddx54-201ENSMUST00000031598 Gm10153A0A1B0GRL1 320 aa2.28□□□□□ -2.05
Ddx54-201ENSMUST00000031598 Gm4553A0A1B0GSA9 284 aa2.28□□□□□ -2.05
Ddx54-201ENSMUST00000031598 Gm2431E9Q8S1 172 aa2.22□□□□□ -2.05
Ddx54-201ENSMUST00000031598 A030005L19RikA0A1Y7VIU2 113 aa2.13□□□□□ -2.07
Ddx54-201ENSMUST00000031598 Gm10229O08631 77 aa2.12□□□□□ -2.07
Ddx54-201ENSMUST00000031598 Gm45337A0A1B0GS71 263 aa2.1□□□□□ -2.07
Ddx54-201ENSMUST00000031598 Phgr1Q8K0G7 91 aa2.08□□□□□ -2.08
Ddx54-201ENSMUST00000031598 AhnakE9Q616 5656 aaKnown RBP2.08□□□□□ -2.08
Ddx54-201ENSMUST00000031598 A0A1Y7VLE6 161 aa2.06□□□□□ -2.08
Ddx54-201ENSMUST00000031598 Gm40460A0A1B0GR10 244 aa2.04□□□□□ -2.08
Ddx54-201ENSMUST00000031598 Gm7579A0A1B0GRJ4 243 aa2.04□□□□□ -2.08
Ddx54-201ENSMUST00000031598 Krtap5-5Q2TA51 241 aa2.04□□□□□ -2.08
Ddx54-201ENSMUST00000031598 Krtap5-4Q62220 223 aa2.04□□□□□ -2.08
Ddx54-201ENSMUST00000031598 Gm39115A0A1B0GSH7 232 aa1.92□□□□□ -2.1
Ddx54-201ENSMUST00000031598 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Ddx54-201ENSMUST00000031598 Krtap21-1Q925H4 128 aa1.82□□□□□ -2.12
Ddx54-201ENSMUST00000031598 Krtap6-2O08884 159 aa1.76□□□□□ -2.13
Ddx54-201ENSMUST00000031598 Gm45618A0A1B0GSA0 219 aa1.68□□□□□ -2.14
Ddx54-201ENSMUST00000031598 Gm29735A0A1B0GT06 219 aa1.54□□□□□ -2.16
Ddx54-201ENSMUST00000031598 A0A1Y7VJ07 166 aa1.44□□□□□ -2.18
Ddx54-201ENSMUST00000031598 A0A286YCP9 139 aa1.32□□□□□ -2.2
Ddx54-201ENSMUST00000031598 Krtap5-1Q64507 230 aa1.18□□□□□ -2.22
Ddx54-201ENSMUST00000031598 Krtap28-13A0A087WQP5 138 aa1.07□□□□□ -2.24
Ddx54-201ENSMUST00000031598 A030003K21RikA0A1Y7VIM3 128 aa0.99□□□□□ -2.25
Ddx54-201ENSMUST00000031598 Gm4559A4IF42 199 aa0.86□□□□□ -2.27
Ddx54-201ENSMUST00000031598 Gm6217A0A1Y7VJK9 128 aa0.79□□□□□ -2.28
Ddx54-201ENSMUST00000031598 Gm7544A0A1Y7VJ58 118 aa0.75□□□□□ -2.29
Ddx54-201ENSMUST00000031598 Krtap28-10A0A1Y7VP58 119 aa0.73□□□□□ -2.29
Ddx54-201ENSMUST00000031598 A030005K14RikA0A1Y7VNY1 122 aa0.68□□□□□ -2.3
Ddx54-201ENSMUST00000031598 A030014E15RikA0A1Y7VJV2 120 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 157.1 ms