RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Lce1cQ9D1C5 147 aa6.44□□□□□ -1.38
Ccdc34-201ENSMUST00000028580 Krtap19-4Q925H7 84 aa6.42□□□□□ -1.38
Ccdc34-201ENSMUST00000028580 Gm11564A2A4L9 201 aa6.35□□□□□ -1.39
Ccdc34-201ENSMUST00000028580 Gm11595B1AQA7 289 aa6.35□□□□□ -1.39
Ccdc34-201ENSMUST00000028580 Krtap4-8B1AQA8 209 aa6.35□□□□□ -1.39
Ccdc34-201ENSMUST00000028580 Syne2Q6ZWQ0 6874 aaKnown RBP6.32□□□□□ -1.4
Ccdc34-201ENSMUST00000028580 A030003K21RikA0A1Y7VIM3 128 aa6.31□□□□□ -1.4
Ccdc34-201ENSMUST00000028580 Lce3bQ9CQM7 98 aa6.26□□□□□ -1.41
Ccdc34-201ENSMUST00000028580 Gm10100J3QK64 120 aa6.24□□□□□ -1.41
Ccdc34-201ENSMUST00000028580 Mt4P47945 62 aa6.21□□□□□ -1.41
Ccdc34-201ENSMUST00000028580 Lce1bQ9D149 137 aa6.21□□□□□ -1.41
Ccdc34-201ENSMUST00000028580 Lce1fB9EJP6 147 aa6.19□□□□□ -1.42
Ccdc34-201ENSMUST00000028580 Lce1a1Q9CQH5 143 aa6.19□□□□□ -1.42
Ccdc34-201ENSMUST00000028580 Krtap4-9B1AQA9 244 aa6.18□□□□□ -1.42
Ccdc34-201ENSMUST00000028580 Gm10142J3KMP7 120 aa6.12□□□□□ -1.43
Ccdc34-201ENSMUST00000028580 Syne1Q6ZWR6 8799 aa6.12□□□□□ -1.43
Ccdc34-201ENSMUST00000028580 Gm38119A0A0A6YX29 146 aa6.09□□□□□ -1.43
Ccdc34-201ENSMUST00000028580 Sprr2hO70559 108 aa5.98□□□□□ -1.45
Ccdc34-201ENSMUST00000028580 Gm6217A0A1Y7VJK9 128 aa5.97□□□□□ -1.45
Ccdc34-201ENSMUST00000028580 Sprr2iO70560 76 aa5.95□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 Lce3cQ91V05 98 aa5.95□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 Krtap4-13Q9D7P3 165 aa5.95□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 Fsip2A2ARZ3 6995 aa5.94□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 2300003K06RikA2A4M0 262 aa5.92□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 Lce3dE9Q8V1 98 aa5.91□□□□□ -1.46
Ccdc34-201ENSMUST00000028580 Lce3eF8VQJ0 98 aa5.89□□□□□ -1.47
Ccdc34-201ENSMUST00000028580 Sprr2kO70562 68 aa5.89□□□□□ -1.47
Ccdc34-201ENSMUST00000028580 Lce3fQ6PAI4 98 aa5.89□□□□□ -1.47
Ccdc34-201ENSMUST00000028580 Sprr2eO70556 76 aa5.84□□□□□ -1.47
Ccdc34-201ENSMUST00000028580 A0A286YCP9 139 aa5.72□□□□□ -1.49
Ccdc34-201ENSMUST00000028580 ObscnA2AAJ9 8891 aaKnown RBP5.71□□□□□ -1.49
Ccdc34-201ENSMUST00000028580 Lce3aQ497I5 98 aa5.68□□□□□ -1.5
Ccdc34-201ENSMUST00000028580 Sprr2fO70557 76 aa5.65□□□□□ -1.51
Ccdc34-201ENSMUST00000028580 Mt1P02802 61 aaKnown RBP5.64□□□□□ -1.51
Ccdc34-201ENSMUST00000028580 Lce1kJ3QP15 125 aa5.63□□□□□ -1.51
Ccdc34-201ENSMUST00000028580 Krtap6-3A0A087WQL6 57 aa5.62□□□□□ -1.51
Ccdc34-201ENSMUST00000028580 Lce1lQ9D1G7 135 aa5.57□□□□□ -1.52
Ccdc34-201ENSMUST00000028580 Krtap31-1Q9D644 177 aa5.5□□□□□ -1.53
Ccdc34-201ENSMUST00000028580 Krtap5-2Q9D5Z7 189 aa5.48□□□□□ -1.53
Ccdc34-201ENSMUST00000028580 Gm11568A2A4M2 211 aa5.46□□□□□ -1.53
Ccdc34-201ENSMUST00000028580 Krtap20-2E9Q0A8 60 aa5.46□□□□□ -1.53
Ccdc34-201ENSMUST00000028580 Krtap9-1Q64526 186 aa5.46□□□□□ -1.53
Ccdc34-201ENSMUST00000028580 Gm10153A0A1B0GRL1 320 aa5.19□□□□□ -1.58
Ccdc34-201ENSMUST00000028580 Krtap4-16Q91W93 202 aa5.12□□□□□ -1.59
Ccdc34-201ENSMUST00000028580 Gm4553A0A1B0GSA9 284 aa5.06□□□□□ -1.6
Ccdc34-201ENSMUST00000028580 Gm11559Q9D3H7 191 aa5.03□□□□□ -1.6
Ccdc34-201ENSMUST00000028580 Gm45337A0A1B0GS71 263 aa5.02□□□□□ -1.61
Ccdc34-201ENSMUST00000028580 Gm10024A0A0A0MQA4 119 aa5□□□□□ -1.61
Ccdc34-201ENSMUST00000028580 Mt3P28184 68 aa4.99□□□□□ -1.61
Ccdc34-201ENSMUST00000028580 Gm40460A0A1B0GR10 244 aa4.88□□□□□ -1.63
Ccdc34-201ENSMUST00000028580 Gm7579A0A1B0GRJ4 243 aa4.88□□□□□ -1.63
Ccdc34-201ENSMUST00000028580 Gm2431E9Q8S1 172 aa4.88□□□□□ -1.63
Ccdc34-201ENSMUST00000028580 Krtap5-5Q2TA51 241 aa4.88□□□□□ -1.63
Ccdc34-201ENSMUST00000028580 Krtap5-4Q62220 223 aa4.88□□□□□ -1.63
Ccdc34-201ENSMUST00000028580 Macf1Q9QXZ0 7354 aaKnown RBP4.82□□□□□ -1.64
Ccdc34-201ENSMUST00000028580 Gm11554B1AQB2 190 aa4.81□□□□□ -1.64
Ccdc34-201ENSMUST00000028580 Gm45618A0A1B0GSA0 219 aa4.76□□□□□ -1.65
Ccdc34-201ENSMUST00000028580 Hmcn1D3YXG0 5634 aa4.71□□□□□ -1.66
Ccdc34-201ENSMUST00000028580 Kmt2dQ6PDK2 5588 aa4.62□□□□□ -1.67
Ccdc34-201ENSMUST00000028580 Gm39115A0A1B0GSH7 232 aa4.54□□□□□ -1.68
Ccdc34-201ENSMUST00000028580 1110025L11RikO09048 78 aa4.36□□□□□ -1.71
Ccdc34-201ENSMUST00000028580 Krtap6-5Q925H3 78 aa4.36□□□□□ -1.71
Ccdc34-201ENSMUST00000028580 Muc16A0A140LJ72 8478 aa4.35□□□□□ -1.71
Ccdc34-201ENSMUST00000028580 Gm11567Q9D141 195 aa4.34□□□□□ -1.71
Ccdc34-201ENSMUST00000028580 Gm29735A0A1B0GT06 219 aa4.29□□□□□ -1.72
Ccdc34-201ENSMUST00000028580 DstQ91ZU6 7393 aaKnown RBP4.24□□□□□ -1.73
Ccdc34-201ENSMUST00000028580 Eppk1Q8R0W0 6548 aa4.21□□□□□ -1.74
Ccdc34-201ENSMUST00000028580 Muc19Q6PZE0 7524 aa4.09□□□□□ -1.75
Ccdc34-201ENSMUST00000028580 Sprr2bO70554 98 aa4.08□□□□□ -1.76
Ccdc34-201ENSMUST00000028580 Gm11639A0A1D5RLM8 5808 aa4.06□□□□□ -1.76
Ccdc34-201ENSMUST00000028580 AhnakE9Q616 5656 aaKnown RBP3.97□□□□□ -1.77
Ccdc34-201ENSMUST00000028580 Gm10229O08631 77 aa3.83□□□□□ -1.8
Ccdc34-201ENSMUST00000028580 NebE9Q1W3 7152 aa3.74□□□□□ -1.81
Ccdc34-201ENSMUST00000028580 Krtap31-2Q8CAY5 177 aa3.73□□□□□ -1.81
Ccdc34-201ENSMUST00000028580 Gpr98Q8VHN7 6298 aaKnown RBP3.65□□□□□ -1.83
Ccdc34-201ENSMUST00000028580 Krtap21-1Q925H4 128 aa3.59□□□□□ -1.83
Ccdc34-201ENSMUST00000028580 Phgr1Q8K0G7 91 aa3.52□□□□□ -1.85
Ccdc34-201ENSMUST00000028580 Krtap6-2O08884 159 aa3.21□□□□□ -1.89
Ccdc34-201ENSMUST00000028580 Krtap5-1Q64507 230 aa3.15□□□□□ -1.9
Ccdc34-201ENSMUST00000028580 Gm4559A4IF42 199 aa3.1□□□□□ -1.91
Retrieved 80 of 22,080 RNA–protein pairs in 68.8 ms