RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Mt4P47945 62 aa5.17□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Krtap4-6Q3V4B7 195 aa5.16□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Sprr2dO70555 85 aa5.16□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Sprr2hO70559 108 aa5.15□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Rnf213E9Q555 5152 aaKnown RBP5.1□□□□□ -1.59
Col17a1-201ENSMUST00000026045 Krtap4-2B1AQ85 167 aa5.07□□□□□ -1.6
Col17a1-201ENSMUST00000026045 Sprr2eO70556 76 aa4.98□□□□□ -1.61
Col17a1-201ENSMUST00000026045 Krtap4-1Q3UUY3 169 aa4.96□□□□□ -1.62
Col17a1-201ENSMUST00000026045 Krtap4-16Q91W93 202 aa4.94□□□□□ -1.62
Col17a1-201ENSMUST00000026045 Muc5bE9Q5I3 4800 aa4.93□□□□□ -1.62
Col17a1-201ENSMUST00000026045 Gm11596B1AQB0 205 aa4.83□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Gm11564A2A4L9 201 aa4.82□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Gm11563B1AQ90 168 aa4.82□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Gm11595B1AQA7 289 aa4.82□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Krtap4-8B1AQA8 209 aa4.82□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Gm11562A0PK51 136 aa4.8□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Krtap4-9B1AQA9 244 aa4.8□□□□□ -1.64
Col17a1-201ENSMUST00000026045 Fsip2A2ARZ3 6995 aa4.79□□□□□ -1.64
Col17a1-201ENSMUST00000026045 2300003K06RikA2A4M0 262 aa4.79□□□□□ -1.64
Col17a1-201ENSMUST00000026045 SspoQ8CG65 4998 aa4.73□□□□□ -1.65
Col17a1-201ENSMUST00000026045 Krtap4-7Q9D732 168 aa4.69□□□□□ -1.66
Col17a1-201ENSMUST00000026045 Krtap4-13Q9D7P3 165 aa4.68□□□□□ -1.66
Col17a1-201ENSMUST00000026045 Lce1kJ3QP15 125 aa4.67□□□□□ -1.66
Col17a1-201ENSMUST00000026045 Muc16A0A140LJ72 8478 aa4.55□□□□□ -1.68
Col17a1-201ENSMUST00000026045 Syne2Q6ZWQ0 6874 aaKnown RBP4.55□□□□□ -1.68
Col17a1-201ENSMUST00000026045 Lce1a1Q9CQH5 143 aa4.48□□□□□ -1.69
Col17a1-201ENSMUST00000026045 Mt3P28184 68 aa4.39□□□□□ -1.71
Col17a1-201ENSMUST00000026045 Mt1P02802 61 aaKnown RBP4.25□□□□□ -1.73
Col17a1-201ENSMUST00000026045 ObscnA2AAJ9 8891 aaKnown RBP4.17□□□□□ -1.74
Col17a1-201ENSMUST00000026045 Krtap6-3A0A087WQL6 57 aa4.16□□□□□ -1.74
Col17a1-201ENSMUST00000026045 Krtap20-2E9Q0A8 60 aa4.15□□□□□ -1.75
Col17a1-201ENSMUST00000026045 Gm11554B1AQB2 190 aa4.12□□□□□ -1.75
Col17a1-201ENSMUST00000026045 Gm11555B1AQ89 175 aa3.96□□□□□ -1.77
Col17a1-201ENSMUST00000026045 Macf1Q9QXZ0 7354 aaKnown RBP3.96□□□□□ -1.78
Col17a1-201ENSMUST00000026045 Sprr2bO70554 98 aa3.92□□□□□ -1.78
Col17a1-201ENSMUST00000026045 DstQ91ZU6 7393 aaKnown RBP3.68□□□□□ -1.82
Col17a1-201ENSMUST00000026045 Eppk1Q8R0W0 6548 aa3.66□□□□□ -1.82
Col17a1-201ENSMUST00000026045 Kmt2dQ6PDK2 5588 aa3.62□□□□□ -1.83
Col17a1-201ENSMUST00000026045 Muc19Q6PZE0 7524 aa3.59□□□□□ -1.83
Col17a1-201ENSMUST00000026045 NebE9Q1W3 7152 aa3.59□□□□□ -1.84
Col17a1-201ENSMUST00000026045 Gm11568A2A4M2 211 aa3.52□□□□□ -1.85
Col17a1-201ENSMUST00000026045 Krtap9-1Q64526 186 aa3.52□□□□□ -1.85
Col17a1-201ENSMUST00000026045 1110025L11RikO09048 78 aa3.46□□□□□ -1.86
Col17a1-201ENSMUST00000026045 Krtap6-5Q925H3 78 aa3.46□□□□□ -1.86
Col17a1-201ENSMUST00000026045 Gm11559Q9D3H7 191 aa3.34□□□□□ -1.87
Col17a1-201ENSMUST00000026045 Phgr1Q8K0G7 91 aa3.28□□□□□ -1.88
Col17a1-201ENSMUST00000026045 Gm10229O08631 77 aa3.22□□□□□ -1.89
Col17a1-201ENSMUST00000026045 Krtap5-2Q9D5Z7 189 aa3.15□□□□□ -1.91
Col17a1-201ENSMUST00000026045 Hmcn1D3YXG0 5634 aa3.05□□□□□ -1.92
Col17a1-201ENSMUST00000026045 Gm11639A0A1D5RLM8 5808 aa2.99□□□□□ -1.93
Col17a1-201ENSMUST00000026045 Gpr98Q8VHN7 6298 aaKnown RBP2.95□□□□□ -1.94
Col17a1-201ENSMUST00000026045 Gm4553A0A1B0GSA9 284 aa2.92□□□□□ -1.94
Col17a1-201ENSMUST00000026045 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Col17a1-201ENSMUST00000026045 Gm10153A0A1B0GRL1 320 aa2.82□□□□□ -1.96
Col17a1-201ENSMUST00000026045 Gm2431E9Q8S1 172 aa2.8□□□□□ -1.96
Col17a1-201ENSMUST00000026045 AhnakE9Q616 5656 aaKnown RBP2.65□□□□□ -1.98
Col17a1-201ENSMUST00000026045 Gm45337A0A1B0GS71 263 aa2.62□□□□□ -1.99
Col17a1-201ENSMUST00000026045 Krtap6-2O08884 159 aa2.62□□□□□ -1.99
Col17a1-201ENSMUST00000026045 A0A1Y7VJH8 109 aa2.59□□□□□ -1.99
Col17a1-201ENSMUST00000026045 Gm40460A0A1B0GR10 244 aa2.57□□□□□ -2
Col17a1-201ENSMUST00000026045 Gm7579A0A1B0GRJ4 243 aa2.57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap5-5Q2TA51 241 aa2.57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap5-4Q62220 223 aa2.57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap21-1Q925H4 128 aa2.55□□□□□ -2
Col17a1-201ENSMUST00000026045 A030005L19RikA0A1Y7VIU2 113 aa2.52□□□□□ -2.01
Col17a1-201ENSMUST00000026045 Gm39115A0A1B0GSH7 232 aa2.35□□□□□ -2.03
Col17a1-201ENSMUST00000026045 A0A1Y7VLE6 161 aa2.23□□□□□ -2.05
Col17a1-201ENSMUST00000026045 Gm29735A0A1B0GT06 219 aa1.93□□□□□ -2.1
Col17a1-201ENSMUST00000026045 Gm45618A0A1B0GSA0 219 aa1.93□□□□□ -2.1
Col17a1-201ENSMUST00000026045 Krtap28-10A0A1Y7VP58 119 aa1.85□□□□□ -2.11
Col17a1-201ENSMUST00000026045 A030003K21RikA0A1Y7VIM3 128 aa1.7□□□□□ -2.14
Col17a1-201ENSMUST00000026045 Gm6217A0A1Y7VJK9 128 aa1.63□□□□□ -2.15
Col17a1-201ENSMUST00000026045 A0A1Y7VJ07 166 aa1.62□□□□□ -2.15
Col17a1-201ENSMUST00000026045 A0A286YCP9 139 aa1.5□□□□□ -2.17
Col17a1-201ENSMUST00000026045 A030005K14RikA0A1Y7VNY1 122 aa1.45□□□□□ -2.18
Col17a1-201ENSMUST00000026045 Krtap5-1Q64507 230 aa1.44□□□□□ -2.18
Col17a1-201ENSMUST00000026045 A030014E15RikA0A1Y7VJV2 120 aa1.44□□□□□ -2.18
Col17a1-201ENSMUST00000026045 Gm7544A0A1Y7VJ58 118 aa1.34□□□□□ -2.2
Col17a1-201ENSMUST00000026045 Krtap28-13A0A087WQP5 138 aa1.31□□□□□ -2.2
Col17a1-201ENSMUST00000026045 Gm4559A4IF42 199 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 45.6 ms