RNA–Protein interactions for RNA: ENSMUST00000025667.12

Rtn3-201, Transcript of Reticulon-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn3, Length 2,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-201ENSMUST00000025667 Gm10142J3KMP7 120 aa5.24□□□□□ -1.57
Rtn3-201ENSMUST00000025667 Sprr2fO70557 76 aa5.22□□□□□ -1.57
Rtn3-201ENSMUST00000025667 Krtap22-2J3QNX6 67 aa5.19□□□□□ -1.58
Rtn3-201ENSMUST00000025667 Lce3bQ9CQM7 98 aa5.13□□□□□ -1.59
Rtn3-201ENSMUST00000025667 Krtap4-9B1AQA9 244 aa5.1□□□□□ -1.59
Rtn3-201ENSMUST00000025667 Fsip2A2ARZ3 6995 aa5.08□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Sprr2eO70556 76 aa5.07□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Mt4P47945 62 aa5.06□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Krtap19-4Q925H7 84 aa5.05□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Lce3dE9Q8V1 98 aa5.04□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Lce3cQ91V05 98 aa5.04□□□□□ -1.6
Rtn3-201ENSMUST00000025667 Sprr2hO70559 108 aa5.01□□□□□ -1.61
Rtn3-201ENSMUST00000025667 Lce3eF8VQJ0 98 aa4.95□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Lce3fQ6PAI4 98 aa4.95□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Krtap4-16Q91W93 202 aa4.94□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Krtap4-13Q9D7P3 165 aa4.92□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Sprr2kO70562 68 aa4.91□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Lce1bQ9D149 137 aa4.9□□□□□ -1.62
Rtn3-201ENSMUST00000025667 Lce3aQ497I5 98 aa4.87□□□□□ -1.63
Rtn3-201ENSMUST00000025667 2300003K06RikA2A4M0 262 aa4.87□□□□□ -1.63
Rtn3-201ENSMUST00000025667 Gm38119A0A0A6YX29 146 aa4.82□□□□□ -1.64
Rtn3-201ENSMUST00000025667 A0A1Y7VJH8 109 aa4.82□□□□□ -1.64
Rtn3-201ENSMUST00000025667 Syne1Q6ZWR6 8799 aa4.82□□□□□ -1.64
Rtn3-201ENSMUST00000025667 Krtap6-3A0A087WQL6 57 aa4.78□□□□□ -1.64
Rtn3-201ENSMUST00000025667 Krtap4-7Q9D732 168 aa4.68□□□□□ -1.66
Rtn3-201ENSMUST00000025667 Lce1lQ9D1G7 135 aa4.68□□□□□ -1.66
Rtn3-201ENSMUST00000025667 Krtap28-10A0A1Y7VP58 119 aa4.67□□□□□ -1.66
Rtn3-201ENSMUST00000025667 Gm7544A0A1Y7VJ58 118 aa4.6□□□□□ -1.67
Rtn3-201ENSMUST00000025667 A030005L19RikA0A1Y7VIU2 113 aa4.52□□□□□ -1.69
Rtn3-201ENSMUST00000025667 A0A1Y7VLE6 161 aa4.5□□□□□ -1.69
Rtn3-201ENSMUST00000025667 ObscnA2AAJ9 8891 aaKnown RBP4.48□□□□□ -1.69
Rtn3-201ENSMUST00000025667 Gm10024A0A0A0MQA4 119 aa4.44□□□□□ -1.7
Rtn3-201ENSMUST00000025667 Krtap20-2E9Q0A8 60 aa4.36□□□□□ -1.71
Rtn3-201ENSMUST00000025667 A030005K14RikA0A1Y7VNY1 122 aa4.32□□□□□ -1.72
Rtn3-201ENSMUST00000025667 Lce1kJ3QP15 125 aa4.3□□□□□ -1.72
Rtn3-201ENSMUST00000025667 Krtap5-2Q9D5Z7 189 aa4.27□□□□□ -1.73
Rtn3-201ENSMUST00000025667 Krtap28-13A0A087WQP5 138 aa4.22□□□□□ -1.73
Rtn3-201ENSMUST00000025667 Gm11568A2A4M2 211 aa4.17□□□□□ -1.74
Rtn3-201ENSMUST00000025667 Krtap9-1Q64526 186 aa4.17□□□□□ -1.74
Rtn3-201ENSMUST00000025667 Gm11559Q9D3H7 191 aa4.12□□□□□ -1.75
Rtn3-201ENSMUST00000025667 Macf1Q9QXZ0 7354 aaKnown RBP4.11□□□□□ -1.75
Rtn3-201ENSMUST00000025667 Muc16A0A140LJ72 8478 aa4.04□□□□□ -1.76
Rtn3-201ENSMUST00000025667 Gm4553A0A1B0GSA9 284 aa4.04□□□□□ -1.76
Rtn3-201ENSMUST00000025667 A030003K21RikA0A1Y7VIM3 128 aa4.04□□□□□ -1.76
Rtn3-201ENSMUST00000025667 Gm6217A0A1Y7VJK9 128 aa4.04□□□□□ -1.76
Rtn3-201ENSMUST00000025667 Gm11554B1AQB2 190 aa4.03□□□□□ -1.76
Rtn3-201ENSMUST00000025667 A0A286YCP9 139 aa3.99□□□□□ -1.77
Rtn3-201ENSMUST00000025667 Mt1P02802 61 aaKnown RBP3.97□□□□□ -1.77
Rtn3-201ENSMUST00000025667 Eppk1Q8R0W0 6548 aa3.93□□□□□ -1.78
Rtn3-201ENSMUST00000025667 Gm2431E9Q8S1 172 aa3.92□□□□□ -1.78
Rtn3-201ENSMUST00000025667 Kmt2dQ6PDK2 5588 aa3.92□□□□□ -1.78
Rtn3-201ENSMUST00000025667 Gm45337A0A1B0GS71 263 aa3.91□□□□□ -1.78
Rtn3-201ENSMUST00000025667 Gm10153A0A1B0GRL1 320 aa3.89□□□□□ -1.79
Rtn3-201ENSMUST00000025667 Hmcn1D3YXG0 5634 aa3.82□□□□□ -1.8
Rtn3-201ENSMUST00000025667 Gm40460A0A1B0GR10 244 aa3.77□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Gm7579A0A1B0GRJ4 243 aa3.77□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Krtap5-5Q2TA51 241 aa3.77□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Krtap5-4Q62220 223 aa3.77□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Muc19Q6PZE0 7524 aa3.74□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Gm11639A0A1D5RLM8 5808 aa3.72□□□□□ -1.81
Rtn3-201ENSMUST00000025667 Gm39115A0A1B0GSH7 232 aa3.66□□□□□ -1.82
Rtn3-201ENSMUST00000025667 DstQ91ZU6 7393 aaKnown RBP3.64□□□□□ -1.83
Rtn3-201ENSMUST00000025667 Mt3P28184 68 aa3.63□□□□□ -1.83
Rtn3-201ENSMUST00000025667 A0A1Y7VJ07 166 aa3.49□□□□□ -1.85
Rtn3-201ENSMUST00000025667 Gpr98Q8VHN7 6298 aaKnown RBP3.44□□□□□ -1.86
Rtn3-201ENSMUST00000025667 NebE9Q1W3 7152 aa3.43□□□□□ -1.86
Rtn3-201ENSMUST00000025667 Gm45618A0A1B0GSA0 219 aa3.34□□□□□ -1.87
Rtn3-201ENSMUST00000025667 AhnakE9Q616 5656 aaKnown RBP3.33□□□□□ -1.88
Rtn3-201ENSMUST00000025667 A030014E15RikA0A1Y7VJV2 120 aa3.22□□□□□ -1.89
Rtn3-201ENSMUST00000025667 1110025L11RikO09048 78 aa3.14□□□□□ -1.91
Rtn3-201ENSMUST00000025667 Sprr2bO70554 98 aa3.14□□□□□ -1.91
Rtn3-201ENSMUST00000025667 Krtap6-5Q925H3 78 aa3.14□□□□□ -1.91
Rtn3-201ENSMUST00000025667 Phgr1Q8K0G7 91 aa3□□□□□ -1.93
Rtn3-201ENSMUST00000025667 Gm29735A0A1B0GT06 219 aa2.79□□□□□ -1.96
Rtn3-201ENSMUST00000025667 Gm10229O08631 77 aa2.74□□□□□ -1.97
Rtn3-201ENSMUST00000025667 Gm11567Q9D141 195 aa2.69□□□□□ -1.98
Rtn3-201ENSMUST00000025667 Krtap21-1Q925H4 128 aa2.62□□□□□ -1.99
Rtn3-201ENSMUST00000025667 Krtap6-2O08884 159 aa2.28□□□□□ -2.04
Rtn3-201ENSMUST00000025667 Krtap5-1Q64507 230 aa2.04□□□□□ -2.08
Rtn3-201ENSMUST00000025667 Gm4559A4IF42 199 aa1.72□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 9.4 ms