RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 Ubr4A2AN08 5180 aa3.16□□□□□ -1.9
Scn4a-201ENSMUST00000021056 Krtap17-1A2A5X6 109 aa3.14□□□□□ -1.91
Scn4a-201ENSMUST00000021056 ZanO88799 5376 aa3.13□□□□□ -1.91
Scn4a-201ENSMUST00000021056 Gm11596B1AQB0 205 aa3.07□□□□□ -1.92
Scn4a-201ENSMUST00000021056 SspoQ8CG65 4998 aa3.06□□□□□ -1.92
Scn4a-201ENSMUST00000021056 Krtap4-1Q3UUY3 169 aa3.03□□□□□ -1.92
Scn4a-201ENSMUST00000021056 2300003K06RikA2A4M0 262 aa3□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-7Q9D732 168 aa3□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11564A2A4L9 201 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11563B1AQ90 168 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11595B1AQA7 289 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-8B1AQA8 209 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-9B1AQA9 244 aa2.95□□□□□ -1.94
Scn4a-201ENSMUST00000021056 Muc5bE9Q5I3 4800 aa2.91□□□□□ -1.94
Scn4a-201ENSMUST00000021056 Krtap4-13Q9D7P3 165 aa2.9□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Sprr2bO70554 98 aa2.87□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Lce1kJ3QP15 125 aa2.85□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Lce1a1Q9CQH5 143 aa2.83□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Lce1a2Q9D1K4 149 aa2.83□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Krtap4-16Q91W93 202 aa2.8□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Gm11562A0PK51 136 aa2.8□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Mt3P28184 68 aa2.79□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Gm11938Q9D3H4 131 aa2.78□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Krtap6-3A0A087WQL6 57 aa2.76□□□□□ -1.97
Scn4a-201ENSMUST00000021056 Mdn1A2ANY6 5589 aaKnown RBP2.74□□□□□ -1.97
Scn4a-201ENSMUST00000021056 Syne1Q6ZWR6 8799 aa2.71□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Gm11554B1AQB2 190 aa2.69□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Fsip2A2ARZ3 6995 aa2.66□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Syne2Q6ZWQ0 6874 aaKnown RBP2.65□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Gm11555B1AQ89 175 aa2.52□□□□□ -2.01
Scn4a-201ENSMUST00000021056 Eppk1Q8R0W0 6548 aa2.42□□□□□ -2.02
Scn4a-201ENSMUST00000021056 Krtap20-2E9Q0A8 60 aa2.4□□□□□ -2.03
Scn4a-201ENSMUST00000021056 Mt1P02802 61 aaKnown RBP2.31□□□□□ -2.04
Scn4a-201ENSMUST00000021056 ObscnA2AAJ9 8891 aaKnown RBP2.28□□□□□ -2.04
Scn4a-201ENSMUST00000021056 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Scn4a-201ENSMUST00000021056 Krtap5-2Q9D5Z7 189 aa2.13□□□□□ -2.07
Scn4a-201ENSMUST00000021056 Kmt2dQ6PDK2 5588 aa2.11□□□□□ -2.07
Scn4a-201ENSMUST00000021056 A0A1Y7VJH8 109 aa2.05□□□□□ -2.08
Scn4a-201ENSMUST00000021056 Gm4553A0A1B0GSA9 284 aa2.01□□□□□ -2.09
Scn4a-201ENSMUST00000021056 DstQ91ZU6 7393 aaKnown RBP2□□□□□ -2.09
Scn4a-201ENSMUST00000021056 NebE9Q1W3 7152 aa1.99□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Gm11568A2A4M2 211 aa1.97□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Krtap9-1Q64526 186 aa1.97□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Gm40460A0A1B0GR10 244 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm7579A0A1B0GRJ4 243 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap5-5Q2TA51 241 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap5-4Q62220 223 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm45337A0A1B0GS71 263 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm11639A0A1D5RLM8 5808 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm10153A0A1B0GRL1 320 aa1.94□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Macf1Q9QXZ0 7354 aaKnown RBP1.94□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm11559Q9D3H7 191 aa1.93□□□□□ -2.1
Scn4a-201ENSMUST00000021056 1110025L11RikO09048 78 aa1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap6-5Q925H3 78 aa1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Phgr1Q8K0G7 91 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm10229O08631 77 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 A030005L19RikA0A1Y7VIU2 113 aa1.9□□□□□ -2.11
Scn4a-201ENSMUST00000021056 AhnakE9Q616 5656 aaKnown RBP1.84□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm2431E9Q8S1 172 aa1.82□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm11567Q9D141 195 aa1.81□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm39115A0A1B0GSH7 232 aa1.79□□□□□ -2.12
Scn4a-201ENSMUST00000021056 A0A1Y7VLE6 161 aa1.71□□□□□ -2.14
Scn4a-201ENSMUST00000021056 Gm45618A0A1B0GSA0 219 aa1.63□□□□□ -2.15
Scn4a-201ENSMUST00000021056 Muc19Q6PZE0 7524 aa1.63□□□□□ -2.15
Scn4a-201ENSMUST00000021056 Gm29735A0A1B0GT06 219 aa1.5□□□□□ -2.17
Scn4a-201ENSMUST00000021056 Krtap6-2O08884 159 aa1.5□□□□□ -2.17
Scn4a-201ENSMUST00000021056 Krtap21-1Q925H4 128 aa1.36□□□□□ -2.19
Scn4a-201ENSMUST00000021056 A0A1Y7VJ07 166 aa1.34□□□□□ -2.19
Scn4a-201ENSMUST00000021056 A0A286YCP9 139 aa1.06□□□□□ -2.24
Scn4a-201ENSMUST00000021056 A030005K14RikA0A1Y7VNY1 122 aa0.94□□□□□ -2.26
Scn4a-201ENSMUST00000021056 A030014E15RikA0A1Y7VJV2 120 aa0.9□□□□□ -2.26
Scn4a-201ENSMUST00000021056 Gm7544A0A1Y7VJ58 118 aa0.89□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap28-10A0A1Y7VP58 119 aa0.89□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap5-1Q64507 230 aa0.87□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap28-13A0A087WQP5 138 aa0.84□□□□□ -2.28
Scn4a-201ENSMUST00000021056 Gm4559A4IF42 199 aa0.81□□□□□ -2.28
Scn4a-201ENSMUST00000021056 A030003K21RikA0A1Y7VIM3 128 aa0.77□□□□□ -2.29
Scn4a-201ENSMUST00000021056 Gm6217A0A1Y7VJK9 128 aa0.76□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 136.6 ms