RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 A0A1Y7VJH8 109 aa4.21□□□□□ -1.73
Tubb1-201ENSMUST00000016399 A030005L19RikA0A1Y7VIU2 113 aa4.2□□□□□ -1.74
Tubb1-201ENSMUST00000016399 Gm11559Q9D3H7 191 aa4.2□□□□□ -1.74
Tubb1-201ENSMUST00000016399 Gpr98Q8VHN7 6298 aaKnown RBP4.12□□□□□ -1.75
Tubb1-201ENSMUST00000016399 Krtap7-1Q9D3I6 87 aa4.11□□□□□ -1.75
Tubb1-201ENSMUST00000016399 Krtap5-2Q9D5Z7 189 aa4.1□□□□□ -1.75
Tubb1-201ENSMUST00000016399 Kmt2dQ6PDK2 5588 aa4.08□□□□□ -1.76
Tubb1-201ENSMUST00000016399 Sprr2iO70560 76 aa4.08□□□□□ -1.76
Tubb1-201ENSMUST00000016399 Gm40193A0A1B0GT39 78 aa4.07□□□□□ -1.76
Tubb1-201ENSMUST00000016399 Lce1kJ3QP15 125 aa4.07□□□□□ -1.76
Tubb1-201ENSMUST00000016399 Muc19Q6PZE0 7524 aa4.02□□□□□ -1.77
Tubb1-201ENSMUST00000016399 Gm4553A0A1B0GSA9 284 aa3.97□□□□□ -1.77
Tubb1-201ENSMUST00000016399 Mp68P56379 58 aa3.93□□□□□ -1.78
Tubb1-201ENSMUST00000016399 Gm11568A2A4M2 211 aa3.91□□□□□ -1.78
Tubb1-201ENSMUST00000016399 Krtap9-1Q64526 186 aa3.91□□□□□ -1.78
Tubb1-201ENSMUST00000016399 Gm2431E9Q8S1 172 aa3.9□□□□□ -1.78
Tubb1-201ENSMUST00000016399 Tnp1P10856 55 aa3.87□□□□□ -1.79
Tubb1-201ENSMUST00000016399 Syne1Q6ZWR6 8799 aa3.84□□□□□ -1.79
Tubb1-201ENSMUST00000016399 Lce3bQ9CQM7 98 aa3.78□□□□□ -1.8
Tubb1-201ENSMUST00000016399 Gm10272F7CZ33 110 aa3.76□□□□□ -1.81
Tubb1-201ENSMUST00000016399 Gm45337A0A1B0GS71 263 aa3.73□□□□□ -1.81
Tubb1-201ENSMUST00000016399 DstQ91ZU6 7393 aaKnown RBP3.73□□□□□ -1.81
Tubb1-201ENSMUST00000016399 NebE9Q1W3 7152 aa3.73□□□□□ -1.81
Tubb1-201ENSMUST00000016399 Hmcn1D3YXG0 5634 aa3.72□□□□□ -1.81
Tubb1-201ENSMUST00000016399 Lce1fB9EJP6 147 aa3.72□□□□□ -1.81
Tubb1-201ENSMUST00000016399 Lce1cQ9D1C5 147 aa3.72□□□□□ -1.81
Tubb1-201ENSMUST00000016399 Krtap4-16Q91W93 202 aa3.66□□□□□ -1.82
Tubb1-201ENSMUST00000016399 Krtap19-4Q925H7 84 aa3.64□□□□□ -1.83
Tubb1-201ENSMUST00000016399 Gm39115A0A1B0GSH7 232 aa3.62□□□□□ -1.83
Tubb1-201ENSMUST00000016399 Gm20538F6Z9R1 75 aa3.61□□□□□ -1.83
Tubb1-201ENSMUST00000016399 Gm40460A0A1B0GR10 244 aa3.57□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Gm7579A0A1B0GRJ4 243 aa3.57□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Krtap5-5Q2TA51 241 aa3.57□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Krtap5-4Q62220 223 aa3.57□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Gm11938Q9D3H4 131 aa3.56□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Gm10153A0A1B0GRL1 320 aa3.55□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Sprr2fO70557 76 aa3.55□□□□□ -1.84
Tubb1-201ENSMUST00000016399 Ndufaf8A2AMZ4 74 aa3.5□□□□□ -1.85
Tubb1-201ENSMUST00000016399 Gm45618A0A1B0GSA0 219 aa3.46□□□□□ -1.86
Tubb1-201ENSMUST00000016399 Mt1P02802 61 aaKnown RBP3.44□□□□□ -1.86
Tubb1-201ENSMUST00000016399 AhnakE9Q616 5656 aaKnown RBP3.41□□□□□ -1.86
Tubb1-201ENSMUST00000016399 Lce3cQ91V05 98 aa3.36□□□□□ -1.87
Tubb1-201ENSMUST00000016399 Sprr2dO70555 85 aa3.34□□□□□ -1.88
Tubb1-201ENSMUST00000016399 Lce3dE9Q8V1 98 aa3.32□□□□□ -1.88
Tubb1-201ENSMUST00000016399 ObscnA2AAJ9 8891 aaKnown RBP3.28□□□□□ -1.88
Tubb1-201ENSMUST00000016399 Lce3eF8VQJ0 98 aa3.25□□□□□ -1.89
Tubb1-201ENSMUST00000016399 Mt3P28184 68 aa3.25□□□□□ -1.89
Tubb1-201ENSMUST00000016399 Lce3fQ6PAI4 98 aa3.25□□□□□ -1.89
Tubb1-201ENSMUST00000016399 4933428G20RikQ9D3X4 101 aa3.15□□□□□ -1.91
Tubb1-201ENSMUST00000016399 Lce3aQ497I5 98 aa3.11□□□□□ -1.91
Tubb1-201ENSMUST00000016399 A0A1Y7VLE6 161 aa3.02□□□□□ -1.93
Tubb1-201ENSMUST00000016399 Gm10100J3QK64 120 aa3.01□□□□□ -1.93
Tubb1-201ENSMUST00000016399 Gm9112A2AI92 75 aa2.99□□□□□ -1.93
Tubb1-201ENSMUST00000016399 Gm10142J3KMP7 120 aa2.93□□□□□ -1.94
Tubb1-201ENSMUST00000016399 Sprr2eO70556 76 aa2.9□□□□□ -1.95
Tubb1-201ENSMUST00000016399 Sprr2hO70559 108 aa2.88□□□□□ -1.95
Tubb1-201ENSMUST00000016399 Gm10024A0A0A0MQA4 119 aa2.73□□□□□ -1.97
Tubb1-201ENSMUST00000016399 Muc16A0A140LJ72 8478 aa2.72□□□□□ -1.97
Tubb1-201ENSMUST00000016399 A0A1Y7VJ07 166 aa2.59□□□□□ -2
Tubb1-201ENSMUST00000016399 Gm29735A0A1B0GT06 219 aa2.58□□□□□ -2
Tubb1-201ENSMUST00000016399 Krtap31-1Q9D644 177 aa2.51□□□□□ -2.01
Tubb1-201ENSMUST00000016399 1110025L11RikO09048 78 aa2.51□□□□□ -2.01
Tubb1-201ENSMUST00000016399 Krtap6-5Q925H3 78 aa2.51□□□□□ -2.01
Tubb1-201ENSMUST00000016399 Gm11567Q9D141 195 aa2.49□□□□□ -2.01
Tubb1-201ENSMUST00000016399 Krtap31-2Q8CAY5 177 aa2.41□□□□□ -2.02
Tubb1-201ENSMUST00000016399 A030003K21RikA0A1Y7VIM3 128 aa2.37□□□□□ -2.03
Tubb1-201ENSMUST00000016399 Krtap28-13A0A087WQP5 138 aa2.26□□□□□ -2.05
Tubb1-201ENSMUST00000016399 Krtap28-10A0A1Y7VP58 119 aa2.25□□□□□ -2.05
Tubb1-201ENSMUST00000016399 Krtap5-1Q64507 230 aa2.25□□□□□ -2.05
Tubb1-201ENSMUST00000016399 A030005K14RikA0A1Y7VNY1 122 aa2.24□□□□□ -2.05
Tubb1-201ENSMUST00000016399 Gm10229O08631 77 aa2.24□□□□□ -2.05
Tubb1-201ENSMUST00000016399 Sprr2bO70554 98 aa2.22□□□□□ -2.05
Tubb1-201ENSMUST00000016399 A030014E15RikA0A1Y7VJV2 120 aa2.1□□□□□ -2.07
Tubb1-201ENSMUST00000016399 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.08
Tubb1-201ENSMUST00000016399 Gm7544A0A1Y7VJ58 118 aa2□□□□□ -2.09
Tubb1-201ENSMUST00000016399 Krtap6-2O08884 159 aa1.98□□□□□ -2.09
Tubb1-201ENSMUST00000016399 A0A286YCP9 139 aa1.8□□□□□ -2.12
Tubb1-201ENSMUST00000016399 Gm6217A0A1Y7VJK9 128 aa1.79□□□□□ -2.12
Tubb1-201ENSMUST00000016399 Phgr1Q8K0G7 91 aa1.71□□□□□ -2.14
Tubb1-201ENSMUST00000016399 Gm4559A4IF42 199 aa1.53□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 82.2 ms