RNA–Protein interactions for RNA: ENSMUST00000000767.5

Rpa1-201, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpa1, Length 2,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-201ENSMUST00000000767 Lce1bQ9D149 137 aa3.21□□□□□ -1.9
Rpa1-201ENSMUST00000000767 Syne1Q6ZWR6 8799 aa3.16□□□□□ -1.9
Rpa1-201ENSMUST00000000767 Gm10100J3QK64 120 aa3.15□□□□□ -1.9
Rpa1-201ENSMUST00000000767 Lce3bQ9CQM7 98 aa3.15□□□□□ -1.91
Rpa1-201ENSMUST00000000767 Lce1gQ9D195 139 aa3.14□□□□□ -1.91
Rpa1-201ENSMUST00000000767 Krtap19-4Q925H7 84 aa3.13□□□□□ -1.91
Rpa1-201ENSMUST00000000767 Lce1fB9EJP6 147 aa3.13□□□□□ -1.91
Rpa1-201ENSMUST00000000767 Lce1a1Q9CQH5 143 aa3.13□□□□□ -1.91
Rpa1-201ENSMUST00000000767 Gm10142J3KMP7 120 aa3.09□□□□□ -1.92
Rpa1-201ENSMUST00000000767 Lce3cQ91V05 98 aa3.01□□□□□ -1.93
Rpa1-201ENSMUST00000000767 Krtap4-6Q3V4B7 195 aa3□□□□□ -1.93
Rpa1-201ENSMUST00000000767 Gm11596B1AQB0 205 aa3□□□□□ -1.93
Rpa1-201ENSMUST00000000767 Lce3dE9Q8V1 98 aa2.99□□□□□ -1.93
Rpa1-201ENSMUST00000000767 Gm38119A0A0A6YX29 146 aa2.96□□□□□ -1.93
Rpa1-201ENSMUST00000000767 Sprr2iO70560 76 aa2.96□□□□□ -1.94
Rpa1-201ENSMUST00000000767 Sprr2hO70559 108 aa2.95□□□□□ -1.94
Rpa1-201ENSMUST00000000767 Lce3eF8VQJ0 98 aa2.95□□□□□ -1.94
Rpa1-201ENSMUST00000000767 Lce3fQ6PAI4 98 aa2.95□□□□□ -1.94
Rpa1-201ENSMUST00000000767 ObscnA2AAJ9 8891 aaKnown RBP2.94□□□□□ -1.94
Rpa1-201ENSMUST00000000767 A030003K21RikA0A1Y7VIM3 128 aa2.94□□□□□ -1.94
Rpa1-201ENSMUST00000000767 Syne2Q6ZWQ0 6874 aaKnown RBP2.93□□□□□ -1.94
Rpa1-201ENSMUST00000000767 Sprr2eO70556 76 aa2.88□□□□□ -1.95
Rpa1-201ENSMUST00000000767 Fsip2A2ARZ3 6995 aa2.88□□□□□ -1.95
Rpa1-201ENSMUST00000000767 Lce3aQ497I5 98 aa2.86□□□□□ -1.95
Rpa1-201ENSMUST00000000767 Mt4P47945 62 aa2.86□□□□□ -1.95
Rpa1-201ENSMUST00000000767 Gm11559Q9D3H7 191 aa2.84□□□□□ -1.96
Rpa1-201ENSMUST00000000767 2300003K06RikA2A4M0 262 aa2.83□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Gm11564A2A4L9 201 aa2.82□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Gm11595B1AQA7 289 aa2.82□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Krtap4-8B1AQA8 209 aa2.82□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Sprr2fO70557 76 aa2.82□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Sprr2kO70562 68 aa2.81□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Gm6217A0A1Y7VJK9 128 aa2.79□□□□□ -1.96
Rpa1-201ENSMUST00000000767 Krtap4-9B1AQA9 244 aa2.77□□□□□ -1.97
Rpa1-201ENSMUST00000000767 Mt1P02802 61 aaKnown RBP2.73□□□□□ -1.97
Rpa1-201ENSMUST00000000767 Lce1lQ9D1G7 135 aa2.73□□□□□ -1.97
Rpa1-201ENSMUST00000000767 Krtap6-3A0A087WQL6 57 aa2.72□□□□□ -1.97
Rpa1-201ENSMUST00000000767 Lce1kJ3QP15 125 aa2.71□□□□□ -1.98
Rpa1-201ENSMUST00000000767 Krtap4-13Q9D7P3 165 aa2.69□□□□□ -1.98
Rpa1-201ENSMUST00000000767 Krtap4-16Q91W93 202 aa2.67□□□□□ -1.98
Rpa1-201ENSMUST00000000767 Gm11568A2A4M2 211 aa2.57□□□□□ -2
Rpa1-201ENSMUST00000000767 Krtap9-1Q64526 186 aa2.57□□□□□ -2
Rpa1-201ENSMUST00000000767 Gm10024A0A0A0MQA4 119 aa2.55□□□□□ -2
Rpa1-201ENSMUST00000000767 A0A286YCP9 139 aa2.55□□□□□ -2
Rpa1-201ENSMUST00000000767 Krtap20-2E9Q0A8 60 aa2.52□□□□□ -2.01
Rpa1-201ENSMUST00000000767 Muc16A0A140LJ72 8478 aa2.45□□□□□ -2.02
Rpa1-201ENSMUST00000000767 Krtap5-2Q9D5Z7 189 aa2.44□□□□□ -2.02
Rpa1-201ENSMUST00000000767 Macf1Q9QXZ0 7354 aaKnown RBP2.43□□□□□ -2.02
Rpa1-201ENSMUST00000000767 Gm10153A0A1B0GRL1 320 aa2.4□□□□□ -2.03
Rpa1-201ENSMUST00000000767 Mt3P28184 68 aa2.4□□□□□ -2.03
Rpa1-201ENSMUST00000000767 Eppk1Q8R0W0 6548 aa2.35□□□□□ -2.03
Rpa1-201ENSMUST00000000767 Hmcn1D3YXG0 5634 aa2.32□□□□□ -2.04
Rpa1-201ENSMUST00000000767 Kmt2dQ6PDK2 5588 aa2.3□□□□□ -2.04
Rpa1-201ENSMUST00000000767 Gm4553A0A1B0GSA9 284 aa2.26□□□□□ -2.05
Rpa1-201ENSMUST00000000767 Gm45618A0A1B0GSA0 219 aa2.23□□□□□ -2.05
Rpa1-201ENSMUST00000000767 Gm45337A0A1B0GS71 263 aa2.21□□□□□ -2.06
Rpa1-201ENSMUST00000000767 Gm11554B1AQB2 190 aa2.18□□□□□ -2.06
Rpa1-201ENSMUST00000000767 Gm2431E9Q8S1 172 aa2.16□□□□□ -2.06
Rpa1-201ENSMUST00000000767 Gm39115A0A1B0GSH7 232 aa2.15□□□□□ -2.06
Rpa1-201ENSMUST00000000767 Gm40460A0A1B0GR10 244 aa2.15□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Gm7579A0A1B0GRJ4 243 aa2.15□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Krtap5-5Q2TA51 241 aa2.15□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Krtap5-4Q62220 223 aa2.15□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Muc19Q6PZE0 7524 aa2.13□□□□□ -2.07
Rpa1-201ENSMUST00000000767 1110025L11RikO09048 78 aa2.11□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Krtap6-5Q925H3 78 aa2.11□□□□□ -2.07
Rpa1-201ENSMUST00000000767 Gm11567Q9D141 195 aa2.09□□□□□ -2.08
Rpa1-201ENSMUST00000000767 Gm29735A0A1B0GT06 219 aa2.07□□□□□ -2.08
Rpa1-201ENSMUST00000000767 Gm11639A0A1D5RLM8 5808 aa2.06□□□□□ -2.08
Rpa1-201ENSMUST00000000767 DstQ91ZU6 7393 aaKnown RBP2.03□□□□□ -2.08
Rpa1-201ENSMUST00000000767 Sprr2bO70554 98 aa1.95□□□□□ -2.1
Rpa1-201ENSMUST00000000767 AhnakE9Q616 5656 aaKnown RBP1.92□□□□□ -2.1
Rpa1-201ENSMUST00000000767 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Rpa1-201ENSMUST00000000767 Gm10229O08631 77 aa1.87□□□□□ -2.11
Rpa1-201ENSMUST00000000767 NebE9Q1W3 7152 aa1.75□□□□□ -2.13
Rpa1-201ENSMUST00000000767 Phgr1Q8K0G7 91 aa1.74□□□□□ -2.13
Rpa1-201ENSMUST00000000767 Krtap21-1Q925H4 128 aa1.73□□□□□ -2.13
Rpa1-201ENSMUST00000000767 Krtap6-2O08884 159 aa1.55□□□□□ -2.16
Rpa1-201ENSMUST00000000767 Krtap5-1Q64507 230 aa1.43□□□□□ -2.18
Rpa1-201ENSMUST00000000767 Gm4559A4IF42 199 aa1.42□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 4110.5 ms