RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 ZSCAN29Q8IWY8 852 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-224ENST00000641711 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 ZNF341Q9BYN7 854 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 SLC4A4Q9Y6R1 1079 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 ROBO3Q96MS0 1386 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 M0R2C6 588 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 LARGE1O95461 756 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 CHGBP05060 677 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 CYP21A2P08686 494 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 NT5C2P49902 561 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 ALX1Q15699 326 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 SBK1Q52WX2 424 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 ANKRD13AQ8IZ07 590 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-224ENST00000641711 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 ZNF112Q9UJU3 913 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
PHGDH-224ENST00000641711 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 HSPD1P10809 573 aaKnown RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 TOB2Q14106 344 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 SDR42E1Q8WUS8 393 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 KLRG1Q96E93 195 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 MCM9Q9NXL9 1143 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 SWAP70Q9UH65 585 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
PHGDH-224ENST00000641711 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
PHGDH-224ENST00000641711 STX6O43752 255 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 MBD3O95983 291 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-224ENST00000641711 SYT1P21579 422 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 ECE1P42892 770 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 TDO2P48775 406 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 MRE11P49959 708 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 HUNKP57058 714 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-224ENST00000641711 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
PHGDH-224ENST00000641711 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 AGXT2Q9BYV1 514 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 NAPBQ9H115 298 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
PHGDH-224ENST00000641711 ANGEL1Q9UNK9 670 aaKnown RBP12.04□□□□□ -0.48
PHGDH-224ENST00000641711 CSADQ9Y600 493 aa12.04□□□□□ -0.48
PHGDH-224ENST00000641711 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 GJB2P29033 226 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 ZNF445P59923 1031 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 GABPAQ06546 454 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.488e-7■■□□□ 12
PHGDH-224ENST00000641711 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 ZFPM1Q8IX07 1006 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 CRACR2BQ8N4Y2 399 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 CCDC102AQ96A19 550 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■■□ 19.6
PHGDH-224ENST00000641711 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 SCAF8Q9UPN6 1271 aaKnown RBP12.03□□□□□ -0.48
PHGDH-224ENST00000641711 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 PTPRFP10586 1907 aa12.03□□□□□ -0.48
PHGDH-224ENST00000641711 GREB1LQ9C091 1923 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-224ENST00000641711 PRKAB2O43741 272 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 F13A1P00488 732 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 SLC3A2P08195 630 aaKnown RBP12.02□□□□□ -0.49
PHGDH-224ENST00000641711 ZBTB48P10074 688 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-224ENST00000641711 PDCP20941 246 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 DEFB115Q30KQ5 88 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-224ENST00000641711 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 MTMR6Q9Y217 621 aa12.02□□□□□ -0.49
PHGDH-224ENST00000641711 PHIPQ8WWQ0 1821 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms