RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 FAM107BQ9H098 131 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 IL25Q9H293 177 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 FOXP1Q9H334 677 aaPredicted RBP9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 RNF216Q9NWF9 866 aaPredicted RBP9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 PCDHA5Q9Y5H7 936 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 SH2B2O14492 632 aaPredicted RBP9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 DNA2P51530 1060 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 ERMNQ8TAM6 284 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
HNRNPU-219ENST00000639628 PARP1P09874 1014 aaKnown RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 PCP11498 1178 aaKnown RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IL6STP40189 918 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 USP8P40818 1118 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IFI16Q16666 785 aaKnown RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 HDXQ7Z353 690 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 ZSCAN10Q96SZ4 725 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IGSF3O75054 1194 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 CCDC122Q5T0U0 273 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 TCERG1LQ5VWI1 586 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 USPL1Q5W0Q7 1092 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 CEP170BQ9Y4F5 1589 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 LIFRP42702 1097 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 MATR3P43243 847 aaKnown RBP eCLIP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 TNIP1Q15025 636 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 NLRP10Q86W26 655 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.861e-13■□□□□ 10.1
HNRNPU-219ENST00000639628 SPTLC3Q9NUV7 552 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IVLP07476 585 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IFNAR1P17181 557 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 KRT9P35527 623 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 BCAMP50895 628 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 TBC1D8BQ0IIM8 1120 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 SPAG5Q96R06 1193 aa9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-219ENST00000639628 IFT172Q9UG01 1749 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 STX10O60499 249 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 RHOXF2BP0C7M4 288 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 LETM2Q2VYF4 491 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 STXBP4Q6ZWJ1 553 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PLIN2Q99541 437 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 RHOXF2Q9BQY4 288 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 NUP58Q9BVL2 599 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 RNF26Q9BY78 433 aaPredicted RBP9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 TSGA10Q9BZW7 698 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 EHMT1Q9H9B1 1298 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PPP2R2CQ9Y2T4 447 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 UTYO14607 1347 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 ADKP55263 362 aaKnown RBP9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 CNNM4Q6P4Q7 775 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PLA2G4DQ86XP0 818 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 NEK11Q8NG66 645 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 LZTS2Q9BRK4 669 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PALLDQ8WX93 1383 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 NOP2P46087 812 aaKnown RBP9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PDE4DQ08499 809 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 ERCC6LQ2NKX8 1250 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 PPP1R13BQ96KQ4 1090 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 NOC4LQ9BVI4 516 aaKnown RBP9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 ZBTB1Q9Y2K1 713 aa9.67□□□□□ -0.86
HNRNPU-219ENST00000639628 hCG_1642624A0A1W2PR95 340 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 USP17L21D6R901 530 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TBCAO75347 108 aaKnown RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 WDHD1O75717 1129 aaPredicted RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 DDAH1O94760 285 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 ERCC5P28715 1186 aaPredicted RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TNNI2P48788 182 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 HLTFQ14527 1009 aaKnown RBP eCLIP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 SPATA1Q5VX52 437 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 CMTR1Q8N1G2 835 aaKnown RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 EFCAB8A8MWE9 144 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 ERVV-1B6SEH8 477 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 CETN1Q12798 172 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 KRT25Q7Z3Z0 450 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 SDR42E1Q8WUS8 393 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 NELFBQ8WX92 580 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 DRC1Q96MC2 740 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TAB2Q9NYJ8 693 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 MAPK8IP1Q9UQF2 711 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 JAG2Q9Y219 1238 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 ABCC12Q96J65 1359 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 A0A087WWV3 80 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 HSF2BPO75031 334 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 CHRNDQ07001 517 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TRAF1Q13077 416 aa9.66□□□□□ -0.86
HNRNPU-219ENST00000639628 TTLL11Q8NHH1 800 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms