RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 FPGSQ05932 587 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 WDR78Q5VTH9 848 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 PORCNQ9H237 461 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 RBPJLQ9UBG7 517 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 AK9Q5TCS8 1911 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 F6X3S4 739 aa13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 SLC5A1P13866 664 aa13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 EPHB4P54760 987 aa13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 MTMR2Q13614 643 aa13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 Q3C1V9 767 aa13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
PTP4A1-207ENST00000639568 FAM196BA6NMK8 535 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 CLTBP09497 229 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 BMP1P13497 986 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 CYP2C19P33261 490 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 CCNA1P78396 465 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 TLE2Q04725 743 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 SNX17Q15036 470 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 FERMT2Q96AC1 680 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 EPHX3Q9H6B9 360 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 FLRT1Q9NZU1 646 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 NDUFB9Q9Y6M9 179 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 IVNS1ABPQ9Y6Y0 642 aa13.77□□□□□ -0.21
PTP4A1-207ENST00000639568 ITGB8P26012 769 aa13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 CAP2P40123 477 aa13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 BACE1P56817 501 aa13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 C1orf53Q5VUE5 145 aa13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 DDX4Q9NQI0 724 aaKnown RBP13.76□□□□□ -0.21
PTP4A1-207ENST00000639568 XIRP2A4UGR9 3374 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 CCDC174Q6PII3 467 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 LPIN2Q92539 896 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 TMEM39AQ9NV64 488 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 LTBP2Q14767 1821 aa13.75□□□□□ -0.21
PTP4A1-207ENST00000639568 FGFR2P21802 821 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 ADGRE1Q14246 886 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 WDR18Q9BV38 432 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
PTP4A1-207ENST00000639568 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 PQBP1O60828 265 aaKnown RBP13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 PTPREP23469 700 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 PBX2P40425 430 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 BTDP43251 543 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 MRE11P49959 708 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 TFF2Q03403 129 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 TRPV1Q8NER1 839 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
PTP4A1-207ENST00000639568 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 GAKO14976 1311 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 USP17L10C9JJH3 530 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 GPR37L1O60883 481 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 ASNSP08243 561 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 HOXC6P09630 235 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 CYBAP13498 195 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 DPP9Q86TI2 863 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 SLC28A3Q9HAS3 691 aa13.72□□□□□ -0.21
PTP4A1-207ENST00000639568 PTPRFP10586 1907 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 SEMA3EO15041 775 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 SEPT4O43236 478 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 KCNQ1P51787 676 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 LRRC41Q15345 812 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 RAB30Q15771 203 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 KAZALD1Q96I82 304 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 ABCF2Q9UG63 623 aa13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 HERC5Q9UII4 1024 aaKnown RBP13.71□□□□□ -0.21
PTP4A1-207ENST00000639568 CHD9Q3L8U1 2897 aa13.71□□□□□ -0.22
PTP4A1-207ENST00000639568 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 DOCK2Q92608 1830 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
PTP4A1-207ENST00000639568 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms