RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
CCDC7-212ENST00000639041 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 APBA3O96018 575 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 ACRP10323 421 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 NME1P15531 152 aaKnown RBP10.95□□□□□ -0.66
CCDC7-212ENST00000639041 RAB6AP20340 208 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 POLR2BP30876 1174 aaKnown RBP10.95□□□□□ -0.66
CCDC7-212ENST00000639041 HID1Q8IV36 788 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 MCATQ8IVS2 390 aaKnown RBP10.95□□□□□ -0.66
CCDC7-212ENST00000639041 SLC9A7Q96T83 725 aa10.95□□□□□ -0.66
CCDC7-212ENST00000639041 RAG1P15918 1043 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 NOS3P29474 1203 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 USP11P51784 963 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 CASP7P55210 303 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 XAGE3Q8WTP9 111 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 WFDC12Q8WWY7 111 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 SCARF2Q96GP6 870 aaPredicted RBP10.94□□□□□ -0.66
CCDC7-212ENST00000639041 CNNM2Q9H8M5 875 aa10.94□□□□□ -0.66
CCDC7-212ENST00000639041 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
CCDC7-212ENST00000639041 UNC5AQ6ZN44 842 aa10.93□□□□□ -0.66
CCDC7-212ENST00000639041 NOP9Q86U38 636 aaKnown RBP10.93□□□□□ -0.66
CCDC7-212ENST00000639041 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC7-212ENST00000639041 SMYD4Q8IYR2 804 aaPredicted RBP10.93□□□□□ -0.66
CCDC7-212ENST00000639041 PHACTR4Q8IZ21 702 aa10.93□□□□□ -0.66
CCDC7-212ENST00000639041 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
CCDC7-212ENST00000639041 UBL7Q96S82 380 aaPredicted RBP10.93□□□□□ -0.66
CCDC7-212ENST00000639041 B2RBV5 119 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 C9orf172C9J069 976 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 DDAH1O94760 285 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
CCDC7-212ENST00000639041 SLBPQ14493 270 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC7-212ENST00000639041 NFE2L2Q16236 605 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 FXNQ16595 210 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 DDR2Q16832 855 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 CDCP2Q5VXM1 449 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 KIF2CQ99661 725 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 GSX1Q9H4S2 264 aaPredicted RBP10.92□□□□□ -0.66
CCDC7-212ENST00000639041 PCDHB10Q9UN67 800 aa10.92□□□□□ -0.66
CCDC7-212ENST00000639041 FAM221BA6H8Z2 402 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 PRAMEF13Q5VWM6 474 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 SLC6A19Q695T7 634 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 CDPF1Q6NVV7 123 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 MRPL41Q8IXM3 137 aaKnown RBP10.91□□□□□ -0.66
CCDC7-212ENST00000639041 FBLIM1Q8WUP2 373 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 CEP41Q9BYV8 373 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 SNTG2Q9NY99 539 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 DAGLAQ9Y4D2 1042 aa10.91□□□□□ -0.66
CCDC7-212ENST00000639041 LTBP3Q9NS15 1303 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 GJB6O95452 261 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 NRG1Q02297 640 aaPredicted RBP10.9□□□□□ -0.66
CCDC7-212ENST00000639041 SGO2Q562F6 1265 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 C6orf15Q6UXA7 325 aaPredicted RBP10.9□□□□□ -0.66
CCDC7-212ENST00000639041 FAM177A1Q8N128 213 aaPredicted RBP10.9□□□□□ -0.66
CCDC7-212ENST00000639041 C19orf47Q8N9M1 422 aaKnown RBP10.9□□□□□ -0.66
CCDC7-212ENST00000639041 KCT2Q8NC54 265 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 DEPDC7Q96QD5 511 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 NACC1Q96RE7 527 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.66
CCDC7-212ENST00000639041 TNFRSF10CO14798 259 aa10.89□□□□□ -0.67
CCDC7-212ENST00000639041 NFICP08651 508 aa10.89□□□□□ -0.67
CCDC7-212ENST00000639041 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
CCDC7-212ENST00000639041 FAM86C1Q9NVL1 165 aa10.89□□□□□ -0.67
CCDC7-212ENST00000639041 PCOLCE2Q9UKZ9 415 aa10.89□□□□□ -0.67
CCDC7-212ENST00000639041 RXRBP28702 533 aa10.88□□□□□ -0.67
CCDC7-212ENST00000639041 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
CCDC7-212ENST00000639041 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
CCDC7-212ENST00000639041 SLFN12Q8IYM2 578 aa10.88□□□□□ -0.67
CCDC7-212ENST00000639041 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
CCDC7-212ENST00000639041 MKL1Q969V6 931 aa10.88□□□□□ -0.67
CCDC7-212ENST00000639041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-212ENST00000639041 GBP1P32455 592 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 RASA3Q14644 834 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-212ENST00000639041 Q6ZS46 218 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 ARMCX6Q7L4S7 300 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 FAM178BQ8IXR5 827 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 FAM46AQ96IP4 442 aaKnown RBP10.87□□□□□ -0.67
CCDC7-212ENST00000639041 FOXQ1Q9C009 403 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
CCDC7-212ENST00000639041 DYNC1LI2O43237 492 aaPredicted RBP10.86□□□□□ -0.67
CCDC7-212ENST00000639041 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
CCDC7-212ENST00000639041 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 VHLLQ6RSH7 139 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
CCDC7-212ENST00000639041 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 CCDC74BQ96LY2 380 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 SEMA6CQ9H3T2 930 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 TMA7Q9Y2S6 64 aaKnown RBP10.86□□□□□ -0.67
CCDC7-212ENST00000639041 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
CCDC7-212ENST00000639041 TLDC2A0PJX2 215 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 RGS13O14921 159 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 UBOX5O94941 541 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 BMP3P12645 472 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 JAZF1Q86VZ6 243 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 TMEM192Q8IY95 271 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
CCDC7-212ENST00000639041 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
CCDC7-212ENST00000639041 PDPK1O15530 556 aa10.84□□□□□ -0.67
CCDC7-212ENST00000639041 GNPTABQ3T906 1256 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms