RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 SMIM24O75264 130 aa17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 PRIM1P49642 420 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 V9GY48 417 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 UHRF1BP1LA0JNW5 1464 aa17.74■□□□□ 0.43
CACNA1A-221ENST00000636012 APBA3O96018 575 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 CTDSPL2Q05D32 466 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 CNGA4Q8IV77 575 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 RDH13Q8NBN7 331 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 BZW2Q9Y6E2 419 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 ZNF131P52739 623 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 NSMFQ6X4W1 530 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 XAB2Q9HCS7 855 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 EBAG9O00559 213 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 TNNI1P19237 187 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 TSTA3Q13630 321 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 SLC9A5Q14940 896 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 CEP128Q6ZU80 1094 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 HOOK2Q96ED9 719 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 ATP11AP98196 1134 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 CSADQ9Y600 493 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 CD19P15391 556 aa17.73■□□□□ 0.43
CACNA1A-221ENST00000636012 OATP04181 439 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 CASQ2O14958 399 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 ITKQ08881 620 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 FAM76AQ8TAV0 307 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 NOC2LQ9Y3T9 749 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 NPATQ14207 1427 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 TBC1D8O95759 1140 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 CPA1P15085 419 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 MX2P20592 715 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 GLG1Q92896 1179 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 GCP02774 474 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 IL1RL1Q01638 556 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
CACNA1A-221ENST00000636012 DEXIO95424 95 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 IGSF22Q8N9C0 903 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 ARHGEF2Q92974 986 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 MAST3O60307 1309 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 PDE8AO60658 829 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 ASIC3Q9UHC3 531 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 PSMB7Q99436 277 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 LACTBP83111 547 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 XAGE2Q96GT9 111 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 ST7Q9NRC1 585 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
CACNA1A-221ENST00000636012 PRDM1O75626 825 aa17.71■□□□□ 0.42
CACNA1A-221ENST00000636012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.42
CACNA1A-221ENST00000636012 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 MGEA5O60502 916 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 BCRP11274 1271 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 LRMPQ12912 555 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 CPSF2Q9P2I0 782 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 TESPA1A2RU30 521 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 CETN3O15182 167 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 SLC12A2P55011 1212 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 PPP2R3AQ06190 1150 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 NEDD9Q14511 834 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 SNX29Q8TEQ0 813 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 PHKBQ93100 1093 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 KIF22Q14807 665 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 FAM102BQ5T8I3 360 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 FAM193BQ96PV7 902 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-221ENST00000636012 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 MMS19Q96T76 1030 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 RABEP2Q9H5N1 569 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 ARHGAP44Q17R89 818 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 ARHGAP27Q6ZUM4 889 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 HDXQ7Z353 690 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 NR1I2O75469 434 aa17.69■□□□□ 0.42
CACNA1A-221ENST00000636012 KRT81Q14533 505 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms