RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 GMEB1Q9Y692 573 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 CAMSAP2Q08AD1 1489 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 PTPN23Q9H3S7 1636 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 APBB1O00213 710 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 ABLIM1O14639 778 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 USO1O60763 962 aaKnown RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 ATP6V1G2O95670 118 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 CCT6AP40227 531 aaKnown RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 POTEEQ6S8J3 1075 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 RPGRIP1Q96KN7 1286 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 RAB21Q9UL25 225 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 RRP7AQ9Y3A4 280 aaKnown RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 USH1CQ9Y6N9 552 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 CUTAO60888 179 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 RAPGEF3O95398 923 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 CCDC166P0CW27 439 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 AARSP49588 968 aaKnown RBP eCLIP6.81□□□□□ -1.328e-8■■□□□ 13.1
CHD2-221ENST00000635856 CLCN2P51788 898 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 CKAP4Q07065 602 aaKnown RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 PDCLQ13371 301 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 MSANTD4Q8NCY6 345 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 IFT74Q96LB3 600 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 MIS12Q9H081 205 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 SIL1Q9H173 461 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 EPN3Q9H201 632 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 DMAP1Q9NPF5 467 aaPredicted RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 LARSQ9P2J5 1176 aaKnown RBP6.81□□□□□ -1.32
CHD2-221ENST00000635856 CFAP45Q9UL16 551 aa6.81□□□□□ -1.32
CHD2-221ENST00000635856 KIAA0556O60303 1618 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 KDM5BQ9UGL1 1544 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 hCG_2014768A0A024R1R8 64 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 SPECC1L-ADORA2AF8WAN1 911 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 H3BQV1 296 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 TBCAO75347 108 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 CCND1P24385 295 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ZC3H6P61129 1189 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 KLC1Q07866 573 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 TRIM29Q14134 588 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 KARSQ15046 597 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 CFAP157Q5JU67 520 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 PPP1R15BQ5SWA1 713 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 IFFO2Q5TF58 517 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 TMEM57Q8N5G2 664 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 SMYD1Q8NB12 490 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 UHMK1Q8TAS1 419 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 SEL1LQ9UBV2 794 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 GGA2Q9UJY4 613 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 TSC22D4Q9Y3Q8 395 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 TRPC1P48995 793 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ATP1A2P50993 1020 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 NCCRP1Q6ZVX7 275 aaPredicted RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 CCAR1Q8IX12 1150 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 PAF1Q8N7H5 531 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ZNF473Q8WTR7 871 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 RUNDC1Q96C34 613 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 CLMNQ96JQ2 1002 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ZSCAN31Q96LW9 406 aaPredicted RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 CORO1BQ9BR76 489 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 FTOQ9C0B1 505 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD2-221ENST00000635856 BRD8Q9H0E9 1235 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 SUCLA2Q9P2R7 463 aaPredicted RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 CROTQ9UKG9 612 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ZNF711Q9Y462 761 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 CFAP73A6NFT4 308 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 GOLGA8AA7E2F4 631 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 VSNL1P62760 191 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 GUCY1B3Q02153 619 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 PKD2Q13563 968 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 IFI16Q16666 785 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 ZNF569Q5MCW4 686 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 MAP7D3Q8IWC1 876 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 RNF10Q8N5U6 811 aaKnown RBP6.8□□□□□ -1.32
CHD2-221ENST00000635856 COG1Q8WTW3 980 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 ABHD8Q96I13 439 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 LIMCH1Q9UPQ0 1083 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 KIF14Q15058 1648 aa6.8□□□□□ -1.32
CHD2-221ENST00000635856 CEP170Q5SW79 1584 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 TRIM27P14373 513 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 RPL13P26373 211 aaKnown RBP6.79□□□□□ -1.32
CHD2-221ENST00000635856 ACCSLQ4AC99 568 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 HIC2Q96JB3 615 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 NDNQ99608 321 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
CHD2-221ENST00000635856 SUGCTQ9HAC7 445 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 ARHGEF10LQ9HCE6 1279 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 TRPV5Q9NQA5 729 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 NOB1Q9ULX3 412 aaKnown RBP6.79□□□□□ -1.32
CHD2-221ENST00000635856 NPTXRO95502 500 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 MMEP08473 750 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 GSTA2P09210 222 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 NAT2P11245 290 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 MYCLP1P12525 358 aaPredicted RBP6.79□□□□□ -1.32
CHD2-221ENST00000635856 UBASH3AP57075 661 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 PABPC4Q13310 644 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD2-221ENST00000635856 NAA35Q5VZE5 725 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 NLRP14Q86W24 1093 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 WDR60Q8WVS4 1066 aa6.79□□□□□ -1.32
CHD2-221ENST00000635856 C6orf203Q9P0P8 240 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms