RNA–Protein interactions for RNA: ENST00000630370.2

DDX3X-220, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-220ENST00000630370 STAMQ92783 540 aa11.21□□□□□ -0.61
DDX3X-220ENST00000630370 RBM17Q96I25 401 aaKnown RBP11.21□□□□□ -0.61
DDX3X-220ENST00000630370 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.62
DDX3X-220ENST00000630370 SPTLC2O15270 562 aa11.21□□□□□ -0.62
DDX3X-220ENST00000630370 NBPF11Q86T75 865 aa11.21□□□□□ -0.62
DDX3X-220ENST00000630370 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.62
DDX3X-220ENST00000630370 TMEM87BQ96K49 555 aa11.21□□□□□ -0.62
DDX3X-220ENST00000630370 ZSCAN10Q96SZ4 725 aaPredicted RBP11.21□□□□□ -0.62
DDX3X-220ENST00000630370 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.62
DDX3X-220ENST00000630370 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.62
DDX3X-220ENST00000630370 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
DDX3X-220ENST00000630370 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 GNAT2P19087 354 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 LRMPQ12912 555 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 CCDC186Q7Z3E2 898 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 CLSTN2Q9H4D0 955 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 MTERF4Q7Z6M4 381 aaKnown RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 STAG1Q8WVM7 1258 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 TRIM5Q9C035 493 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 CNNM2Q9H8M5 875 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 MYH7P12883 1935 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 COBLO75128 1261 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 RXRBP28702 533 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 NTRK3Q16288 839 aa11.2□□□□□ -0.62
DDX3X-220ENST00000630370 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 C11orf57Q6ZUT1 292 aaPredicted RBP11.2□□□□□ -0.62
DDX3X-220ENST00000630370 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 TPM3P06753 285 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 CASP1P29466 404 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 CDC25AP30304 524 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 ZNF174Q15697 407 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 USP49Q70CQ1 688 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 PCNTO95613 3336 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 FOXN1O15353 648 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 ZNF165P49910 485 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 SHROOM1Q2M3G4 852 aaPredicted RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 TTF2Q9UNY4 1162 aaKnown RBP11.19□□□□□ -0.62
DDX3X-220ENST00000630370 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
DDX3X-220ENST00000630370 WNT7AO00755 349 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 SAFBQ15424 915 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 ALX1Q15699 326 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 PLIN2Q99541 437 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 WNK3Q9BYP7 1800 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 CDKL5O76039 1030 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 RBM6P78332 1123 aaKnown RBP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.624e-7■■■■■ 30.9
DDX3X-220ENST00000630370 ZNF75DP51815 510 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
DDX3X-220ENST00000630370 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
DDX3X-220ENST00000630370 BECN2A8MW95 431 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 CTCFLQ8NI51 663 aaPredicted RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 SHISA4Q96DD7 197 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 FRMPD2Q68DX3 1309 aaPredicted RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 PDE4BQ07343 736 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
DDX3X-220ENST00000630370 KAT14Q9H8E8 782 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 LEMD3Q9Y2U8 911 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
DDX3X-220ENST00000630370 BAG3O95817 575 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 PFKFB1P16118 471 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 PNOCQ13519 176 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
DDX3X-220ENST00000630370 C21orf2O43822 256 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 LIFRP42702 1097 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 NLRP5P59047 1200 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 SEC23AQ15436 765 aa11.16□□□□□ -0.62
DDX3X-220ENST00000630370 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms