RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 EPAS1Q99814 870 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 LMBRD1Q9NUN5 540 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
LINC00538-201ENST00000626109 TTF2Q9UNY4 1162 aaKnown RBP13.51□□□□□ -0.25
LINC00538-201ENST00000626109 ESPNB1AK53 854 aa13.5□□□□□ -0.25
LINC00538-201ENST00000626109 LMNB1P20700 586 aa13.5□□□□□ -0.25
LINC00538-201ENST00000626109 PI4K2BQ8TCG2 481 aa13.5□□□□□ -0.25
LINC00538-201ENST00000626109 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
LINC00538-201ENST00000626109 BOLA2Q9H3K6 86 aa13.5□□□□□ -0.25
LINC00538-201ENST00000626109 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
LINC00538-201ENST00000626109 MCAMP43121 646 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 MTA1Q13330 715 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 ANKRD23Q86SG2 305 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 FECHP22830 423 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 CHAF1AQ13111 956 aaPredicted RBP13.49□□□□□ -0.25
LINC00538-201ENST00000626109 SCARF1Q14162 830 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
LINC00538-201ENST00000626109 SPATA5Q8NB90 893 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 MYCBPQ99417 103 aaPredicted RBP13.49□□□□□ -0.25
LINC00538-201ENST00000626109 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
LINC00538-201ENST00000626109 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
LINC00538-201ENST00000626109 PALM3A6NDB9 673 aaPredicted RBP13.48□□□□□ -0.25
LINC00538-201ENST00000626109 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 MBD3O95983 291 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 SERPINB4P48594 390 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 CUL4AQ13619 759 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
LINC00538-201ENST00000626109 HAUS7Q99871 368 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 ZNRF3Q9ULT6 936 aa13.48□□□□□ -0.25
LINC00538-201ENST00000626109 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
LINC00538-201ENST00000626109 LDHCP07864 332 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 TDO2P48775 406 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 PRELPP51888 382 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
LINC00538-201ENST00000626109 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
LINC00538-201ENST00000626109 PI16Q6UXB8 463 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
LINC00538-201ENST00000626109 COL4A5P29400 1685 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 COL1A1P02452 1464 aaPredicted RBP13.47□□□□□ -0.25
LINC00538-201ENST00000626109 ZAP70P43403 619 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 GTF2IP78347 998 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 ZSCAN23Q3MJ62 389 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 CNTROBQ8N137 903 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 WDR66Q8TBY9 1149 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 ZHX3Q9H4I2 956 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 RNF181Q9P0P0 153 aa13.47□□□□□ -0.25
LINC00538-201ENST00000626109 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.25
LINC00538-201ENST00000626109 ODR4Q5SWX8 454 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 TSC1Q92574 1164 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00538-201ENST00000626109 PAG1Q9NWQ8 432 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 JAG2Q9Y219 1238 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
LINC00538-201ENST00000626109 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 HSD3B2P26439 372 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
LINC00538-201ENST00000626109 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
LINC00538-201ENST00000626109 TTLL5Q6EMB2 1281 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 KIAA1211Q6ZU35 1233 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 SYAP1Q96A49 352 aaPredicted RBP13.45□□□□□ -0.26
LINC00538-201ENST00000626109 RFC5P40937 340 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 PKP1Q13835 747 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 KCTD2Q14681 263 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 STRIP1Q5VSL9 837 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 CAPN10Q9HC96 672 aa13.45□□□□□ -0.26
LINC00538-201ENST00000626109 DIS3Q9Y2L1 958 aaKnown RBP13.45□□□□□ -0.26
LINC00538-201ENST00000626109 SALL1Q9NSC2 1324 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 FZD9O00144 591 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 TIMM44O43615 452 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 RAD17O75943 681 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 HSPA4P34932 840 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 RUFY2Q8WXA3 655 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 RSPH1Q8WYR4 309 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
LINC00538-201ENST00000626109 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 ZDHHC9Q9Y397 364 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
LINC00538-201ENST00000626109 TNIP1Q15025 636 aa13.43□□□□□ -0.26
LINC00538-201ENST00000626109 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
LINC00538-201ENST00000626109 MUC3BQ9H195 1237 aa13.43□□□□□ -0.26
LINC00538-201ENST00000626109 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
LINC00538-201ENST00000626109 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
LINC00538-201ENST00000626109 SBF1O95248 1867 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms