RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 KIF3CO14782 793 aa6.98□□□□□ -1.29
CDKL5-205ENST00000623535 PPP2R5AQ15172 486 aa6.98□□□□□ -1.29
CDKL5-205ENST00000623535 TTC23LQ6PF05 361 aa6.98□□□□□ -1.29
CDKL5-205ENST00000623535 KRT26Q7Z3Y9 468 aa6.98□□□□□ -1.29
CDKL5-205ENST00000623535 BCAP29Q9UHQ4 241 aa6.98□□□□□ -1.29
CDKL5-205ENST00000623535 THEM5Q8N1Q8 247 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 MAP3K13O43283 966 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 TMCC1O94876 653 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-205ENST00000623535 PPP1R7Q15435 360 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 OLA1Q9NTK5 396 aaKnown RBP6.97□□□□□ -1.29
CDKL5-205ENST00000623535 C9orf84Q5VXU9 1444 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ZNF197O14709 1029 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 HSPA1LP34931 641 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 PHBP35232 272 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 DNA2P51530 1060 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 MICU3Q86XE3 530 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 IFT122Q9HBG6 1241 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ANGPTL3Q9Y5C1 460 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 MAP3K15Q6ZN16 1313 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 HIBADHP31937 336 aaKnown RBP6.97□□□□□ -1.29
CDKL5-205ENST00000623535 CNGA4Q8IV77 575 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ATP6V0A1Q93050 837 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 DDX50Q9BQ39 737 aaKnown RBP6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ATP2B4P23634 1241 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 KRT9P35527 623 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 HYOU1Q9Y4L1 999 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 INPP1P49441 399 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 GBP6Q6ZN66 633 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 CALCOCO2Q13137 446 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 JRKLQ9Y4A0 524 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ZBTB43O43298 467 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 IL15P40933 162 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-205ENST00000623535 ASPHQ12797 758 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 SNAPC4Q5SXM2 1469 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 FGD5Q6ZNL6 1462 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 IQCB1Q15051 598 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 GDAP1Q8TB36 358 aa6.97□□□□□ -1.29
CDKL5-205ENST00000623535 NEUROG2Q9H2A3 272 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 MAP3K2Q9Y2U5 619 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 IL16Q14005 1332 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 DENND3A2RUS2 1198 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 IRS4O14654 1257 aaPredicted RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 AK2P54819 239 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 ZNF174Q15697 407 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 VWA3BQ502W6 1294 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 TEKT2Q9UIF3 430 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 PCDHB8Q9UN66 801 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 MRPL11Q9Y3B7 192 aaKnown RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 PCDHB13Q9Y5F0 798 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 ALDH1A1P00352 501 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 RNF139Q8WU17 664 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 CDHR1Q96JP9 859 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 PAIP2Q9BPZ3 127 aaKnown RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 PKD2L1Q9P0L9 805 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 IPO5O00410 1097 aaKnown RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 GIGYF1O75420 1035 aaPredicted RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 PUM3Q15397 648 aaKnown RBP6.96□□□□□ -1.29
CDKL5-205ENST00000623535 TMEM259Q4ZIN3 620 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 TCP11Q8WWU5 503 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 RGL1Q9NZL6 768 aa6.96□□□□□ -1.29
CDKL5-205ENST00000623535 FAM83GA6ND36 823 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 PPP2R5CQ13362 524 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 RRAGBQ5VZM2 374 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 FCHSD1Q86WN1 690 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 CENPKQ9BS16 269 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 COPB2P35606 906 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 ENOX1Q8TC92 643 aaKnown RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 VPS50Q96JG6 964 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 MMS19Q96T76 1030 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 ZHX1Q9UKY1 873 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 ZYXQ15942 572 aaKnown RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 CASC4Q6P4E1 433 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 RAB44Q7Z6P3 723 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 TTC30BQ8N4P2 665 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 AKT3Q9Y243 479 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 PLCH2O75038 1416 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 ATXN8OSP0DMR3 200 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 EPHB1P54762 984 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 DNAJC21Q5F1R6 531 aaKnown RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 NEK11Q8NG66 645 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 HPCAL4Q9UM19 191 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 UHRF1BP1LA0JNW5 1464 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 MAATS1Q7Z4T9 603 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC38Q502W7 563 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 PPP4R1Q8TF05 950 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 ZKSCAN3Q9BRR0 538 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
CDKL5-205ENST00000623535 CD19P15391 556 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 NAA30Q147X3 362 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CACTINQ8WUQ7 758 aaKnown RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 INO80BQ9C086 356 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 PIM2Q9P1W9 311 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms