RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TRIB2Q92519 343 aa9.06□□□□□ -0.96
SCAMP1-206ENST00000618166 RNPC3Q96LT9 517 aaKnown RBP9.06□□□□□ -0.96
SCAMP1-206ENST00000618166 SENP6Q9GZR1 1112 aaPredicted RBP9.06□□□□□ -0.96
SCAMP1-206ENST00000618166 INPP5BP32019 993 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 CCT4P50991 539 aaKnown RBP9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 FOXK2Q01167 660 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 JARID2Q92833 1246 aaPredicted RBP9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 TIFAQ96CG3 184 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 UIMC1Q96RL1 719 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 CD320Q9NPF0 282 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 PRKAG2Q9UGJ0 569 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 MINPP1Q9UNW1 487 aa9.05□□□□□ -0.96
SCAMP1-206ENST00000618166 DCHS1Q96JQ0 3298 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 CACNB3P54284 484 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 RTP1P59025 263 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 PPATQ06203 517 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 ANKRD18AQ8IVF6 992 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 SCUBE3Q8IX30 993 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 KCNH4Q9UQ05 1017 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 ATP11BQ9Y2G3 1177 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 ARAP2Q8WZ64 1704 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
SCAMP1-206ENST00000618166 PRR33A8MZF0 331 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 PI4K2BG5E9Z4 385 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 ITGB8P26012 769 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 CCND3P30281 292 aaPredicted RBP9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 MAP3K21Q5TCX8 1036 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 COA7Q96BR5 231 aa9.03□□□□□ -0.96
SCAMP1-206ENST00000618166 TRIM43BA6NCK2 446 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 SNAP23O00161 211 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 TRIM43Q96BQ3 446 aaPredicted RBP9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 CD209Q9NNX6 404 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 BSDC1Q9NW68 430 aaPredicted RBP9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 GJD2Q9UKL4 321 aa9.02□□□□□ -0.97
SCAMP1-206ENST00000618166 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 CCDC152Q4G0S7 254 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 MIGA2Q7L4E1 593 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 SPSB2Q99619 263 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 ADGRG1Q9Y653 693 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 ZDBF2Q9HCK1 2354 aa9.01□□□□□ -0.97
SCAMP1-206ENST00000618166 RCCD1A6NED2 376 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 CACNB2Q08289 660 aaPredicted RBP9□□□□□ -0.97
SCAMP1-206ENST00000618166 PBX4Q9BYU1 374 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 PDLIM7Q9NR12 457 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 DAGLAQ9Y4D2 1042 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 DOCK3Q8IZD9 2030 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 LRRC37A2A6NM11 1700 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 SPEF2Q9C093 1822 aa9□□□□□ -0.97
SCAMP1-206ENST00000618166 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 CYP2B6P20813 491 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 SMCR8Q8TEV9 937 aaPredicted RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 PNISRQ8TF01 805 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 BAHCC1Q9P281 2608 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 PLXNB2O15031 1838 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 HTATSF1O43719 755 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 TRIM60Q495X7 471 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 GADL1Q6ZQY3 521 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 ATP13A2Q9NQ11 1180 aa8.99□□□□□ -0.97
SCAMP1-206ENST00000618166 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 KMT2BQ9UMN6 2715 aaPredicted RBP8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 ERC2O15083 957 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 TNNI2P48788 182 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 PTGDRQ13258 359 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 CNGB1Q14028 1251 aaPredicted RBP8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 CCL14Q16627 93 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 AAK1Q2M2I8 961 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 CC2D1BQ5T0F9 858 aaKnown RBP8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 MYO15AQ9UKN7 3530 aa8.98□□□□□ -0.97
SCAMP1-206ENST00000618166 A0A0G2JLL6 359 aaPredicted RBP8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 PDE8AO60658 829 aa8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 PEX10O60683 326 aa8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 PRRT2Q7Z6L0 340 aaPredicted RBP8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 GREM2Q9H772 168 aa8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 TTF2Q9UNY4 1162 aaKnown RBP8.97□□□□□ -0.97
SCAMP1-206ENST00000618166 FAM181BA6NEQ2 426 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CRKP46108 304 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 GRIK5Q16478 980 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 FAM110CQ1W6H9 321 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 KRT24Q2M2I5 525 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 SLC39A5Q6ZMH5 540 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CCDC129Q6ZRS4 1044 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms