RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 BCORQ6W2J9 1755 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ABCC6O95255 1503 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 AMHP03971 560 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 GPS2Q13227 327 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 NDUFAF2Q8N183 169 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PHKBQ93100 1093 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CCDC114Q96M63 670 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 NUP188Q5SRE5 1749 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 TOGARAM1Q9Y4F4 1720 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RANBP6O60518 1105 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 PRKAR2BP31323 418 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 TAF7Q15545 349 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 MUM1L1Q5H9M0 696 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RBM46Q8TBY0 533 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 TRIM17Q9Y577 477 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ZNF213O14771 459 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CPT1AP50416 773 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CREMQ03060 361 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 NR1H3Q13133 447 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 IL31Q6EBC2 164 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SWAP70Q9UH65 585 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SH3TC1Q8TE82 1336 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PHACTR2O75167 634 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 UBE4AQ14139 1066 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 FAM114A1Q8IWE2 563 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SOCS4Q8WXH5 440 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ACSF2Q96CM8 615 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 CNNM2Q9H8M5 875 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 ABCA3Q99758 1704 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SCN4AP35499 1836 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 IGFBP4P22692 258 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 DCTN1Q14203 1278 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ZNF174Q15697 407 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 H0YCG3 227 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RECQLP46063 649 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 SAMD7Q7Z3H4 446 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 AACSQ86V21 672 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 STK39Q9UEW8 545 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CALRP27797 417 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 CHADLQ6NUI6 762 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 HS2ST1Q7LGA3 356 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 TEX11Q8IYF3 940 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 LSM7Q9UK45 103 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 ZNF233A6NK53 670 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RIOK1Q9BRS2 568 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 ARFGEF2Q9Y6D5 1785 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 MYCP01106 439 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 SERPINB2P05120 415 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PRPF38AQ8NAV1 312 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 CDHR1Q96JP9 859 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 MYPNQ86TC9 1320 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CT47B1P0C2W7 299 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 KRT26Q7Z3Y9 468 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ARPP21Q9UBL0 812 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 CDHR2Q9BYE9 1310 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 BECN2A8MW95 431 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PTPREP23469 700 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CIITAP33076 1130 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RRP1P56182 461 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 EZH2Q15910 746 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 NECAB2Q7Z6G3 386 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SYCP3Q8IZU3 236 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ZSCAN1Q8NBB4 408 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 UBA5Q9GZZ9 404 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 CCDC113Q9H0I3 377 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 ZNF277Q9NRM2 450 aaPredicted RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 SLIT1O75093 1534 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 ERBB4Q15303 1308 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 C7orf31Q8N865 590 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 PCSK9Q8NBP7 692 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 PRRX2Q99811 253 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 USP17L3A6NCW0 530 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 USP17L4A6NCW7 530 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 HEXIM1O94992 359 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 MOCS3O95396 460 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 KIZQ2M2Z5 673 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 E4F1Q66K89 784 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 IQCEQ6IPM2 695 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 USP50Q70EL3 339 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 USP17L1Q7RTZ2 530 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 TADA2BQ86TJ2 420 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 ANKRD13AQ8IZ07 590 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 OTUD6BQ8N6M0 293 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 GANCQ8TET4 914 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 APOL6Q9BWW8 343 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 MTERF2Q49AM1 385 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 CEP68Q76N32 757 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 IBTKQ9P2D0 1353 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 WDR90Q96KV7 1748 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 RPTORQ8N122 1335 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 EPHX2P34913 555 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 NOX5Q96PH1 765 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 ENC1O14682 589 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 IDI1Q13907 227 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 DHX8Q14562 1220 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 BRWD3Q6RI45 1802 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 MYH7BA7E2Y1 1941 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms