RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PRKCZQ05513 592 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
TARDBP-218ENST00000617172 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.532e-12■□□□□ 8.7
TARDBP-218ENST00000617172 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-218ENST00000617172 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-218ENST00000617172 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-218ENST00000617172 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-218ENST00000617172 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-218ENST00000617172 IRF5Q13568 498 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 MTMR2Q13614 643 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 C20orf194Q5TEA3 1177 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.53
TARDBP-218ENST00000617172 ADCY3O60266 1144 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 GJB1P08034 283 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 FLT3LGP49771 235 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 USP14P54578 494 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-218ENST00000617172 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-218ENST00000617172 HAUS7Q99871 368 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 BOLA2Q9H3K6 86 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
TARDBP-218ENST00000617172 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
TARDBP-218ENST00000617172 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 GDF11O95390 407 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 MYCP01106 439 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-218ENST00000617172 GH2P01242 217 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 PLCD1P51178 756 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 JAG1P78504 1218 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 RNF208Q9H0X6 261 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 DCTPP1Q9H773 170 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 MORF4L1Q9UBU8 362 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 GABRQQ9UN88 632 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 BRCA2P51587 3418 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 PDE4DIPQ5VU43 2346 aa11.69□□□□□ -0.54
TARDBP-218ENST00000617172 CCL5P13501 91 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 ADD2P35612 726 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 GJA8P48165 433 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 GABPAQ06546 454 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 MTFR1Q15390 333 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 GPRC5AQ8NFJ5 357 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 C12orf42Q96LP6 360 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 P2RX7Q99572 595 aaKnown RBP11.68□□□□□ -0.54
TARDBP-218ENST00000617172 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
TARDBP-218ENST00000617172 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 SWAP70Q9UH65 585 aa11.68□□□□□ -0.54
TARDBP-218ENST00000617172 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 SHMT1P34896 483 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 HERVK_113P62684 666 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
TARDBP-218ENST00000617172 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
TARDBP-218ENST00000617172 FEZ1Q99689 392 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
TARDBP-218ENST00000617172 MAPK4P31152 587 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-218ENST00000617172 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 GJD2Q9UKL4 321 aa11.66□□□□□ -0.54
TARDBP-218ENST00000617172 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-218ENST00000617172 MBD4O95243 580 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 SGPL1O95470 568 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 INHAP05111 366 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
TARDBP-218ENST00000617172 ELNP15502 786 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 ERVK-24P63145 666 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms