RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ETAA1Q9NY74 926 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.15□□□□□ -0.79
VPS11-206ENST00000614944 LRP2BPQ9P2M1 347 aa10.15□□□□□ -0.79
VPS11-206ENST00000614944 IDH1O75874 414 aaKnown RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 FGRP09769 529 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
VPS11-206ENST00000614944 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 ZNF445P59923 1031 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 NCBP1Q09161 790 aaKnown RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 STRIP1Q5VSL9 837 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 ACRBPQ8NEB7 543 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 ZNF384Q8TF68 577 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 ZSCAN31Q96LW9 406 aaPredicted RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 ZC3H12CQ9C0D7 883 aaKnown RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 PIM2Q9P1W9 311 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 MYO3BQ8WXR4 1341 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 PLCG2P16885 1265 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 EVCP57679 992 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 NAA16Q6N069 864 aaPredicted RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 KRBA2Q6ZNG9 492 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 SEC62Q99442 399 aaKnown RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 PDGFDQ9GZP0 370 aaPredicted RBP10.14□□□□□ -0.79
VPS11-206ENST00000614944 ATP8A2Q9NTI2 1148 aa10.14□□□□□ -0.79
VPS11-206ENST00000614944 MAGEB6P1A0A0J9YX57 407 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 LDHBP07195 334 aaKnown RBP10.13□□□□□ -0.79
VPS11-206ENST00000614944 CYP21A2P08686 494 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 MECOMQ03112 1051 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 IMMTQ16891 758 aaKnown RBP10.13□□□□□ -0.79
VPS11-206ENST00000614944 AP1ARQ63HQ0 302 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 NACAP1Q9BZK3 213 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 MROH7-TTC4A0A0A0MT08 1334 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 NID2Q14112 1375 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 SCN9AQ15858 1988 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 GPR75-ASB3A0A0A6YYF3 556 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 WTIPA6NIX2 430 aaPredicted RBP10.13□□□□□ -0.79
VPS11-206ENST00000614944 RPS6KB1P23443 525 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 LCMT1Q9UIC8 334 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 CYP46A1Q9Y6A2 500 aa10.13□□□□□ -0.79
VPS11-206ENST00000614944 GSG1L2A8MUP6 293 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 CCP110O43303 1012 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 DPEP1P16444 411 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 CYP7A1P22680 504 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 SRLQ86TD4 932 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
VPS11-206ENST00000614944 NUB1Q9Y5A7 615 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 CHRNA5P30532 468 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 EXOSC10Q01780 885 aaKnown RBP10.12□□□□□ -0.79
VPS11-206ENST00000614944 TEX35Q5T0J7 233 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 SDR16C5Q8N3Y7 309 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
VPS11-206ENST00000614944 C6orf229H3BNL8 230 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 FGAP02671 866 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 NAIF1Q69YI7 327 aaPredicted RBP10.12□□□□□ -0.79
VPS11-206ENST00000614944 IFNL3Q8IZI9 196 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 STAG1Q8WVM7 1258 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 RBSNQ9H1K0 784 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
VPS11-206ENST00000614944 MBD4O95243 580 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 BAG3O95817 575 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 MAGEA9P43362 315 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 RRP15Q9Y3B9 282 aaKnown RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 RCAN1P53805 252 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 KLHL40Q2TBA0 621 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 MFSD4BQ5TF39 518 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 CRNKL1Q9BZJ0 848 aaKnown RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 TPD52L2O43399 206 aaKnown RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 SETSIPP0DME0 302 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 ADCY2Q08462 1091 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 DHX32Q7L7V1 743 aaKnown RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 TRIM74Q86UV6 250 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 TRIM73Q86UV7 250 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 TATDN2Q93075 761 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 MAF1Q9H063 256 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 EPB41L4AQ9HCS5 686 aaPredicted RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 SPTLC3Q9NUV7 552 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 FAM53CQ9NYF3 392 aa10.11□□□□□ -0.79
VPS11-206ENST00000614944 ARPP21Q9UBL0 812 aaPredicted RBP10.11□□□□□ -0.79
VPS11-206ENST00000614944 E7EWF7 191 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 KINO60870 393 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 CD151P48509 253 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 NEK4P51957 841 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 DALRD3Q5D0E6 543 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 LCORLQ8N3X6 602 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 RNF41Q9H4P4 317 aaPredicted RBP10.1□□□□□ -0.79
VPS11-206ENST00000614944 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 MYH1P12882 1939 aa10.1□□□□□ -0.79
VPS11-206ENST00000614944 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms