RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PRRT2Q7Z6L0 340 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-226ENST00000611736 ZNF296Q8WUU4 475 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-226ENST00000611736 OSBPL3Q9H4L5 887 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 SHMT1P34896 483 aa31.23■■■□□ 2.59
VEGFA-226ENST00000611736 SPP2Q13103 211 aa31.23■■■□□ 2.59
VEGFA-226ENST00000611736 AMOTL1Q8IY63 956 aa31.23■■■□□ 2.59
VEGFA-226ENST00000611736 ZBTB21Q9ULJ3 1066 aa31.23■■■□□ 2.59
VEGFA-226ENST00000611736 USP17L12C9JPN9 530 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 USP17L21D6R901 530 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 GABPAQ06546 454 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 CERKLQ49MI3 558 aaPredicted RBP31.22■■■□□ 2.59
VEGFA-226ENST00000611736 GADL1Q6ZQY3 521 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 ZNF280CQ8ND82 737 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 RILPL2Q969X0 211 aa31.22■■■□□ 2.59
VEGFA-226ENST00000611736 GSG1L2A8MUP6 293 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 GH2P01242 217 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 PDE4AP27815 886 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 ANKRD23Q86SG2 305 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 SLC44A5Q8NCS7 719 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 DYNLL2Q96FJ2 89 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 TBC1D2Q9BYX2 928 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 ZFYVE28Q9HCC9 887 aa31.21■■■□□ 2.59
VEGFA-226ENST00000611736 ZCCHC17Q9NP64 241 aaKnown RBP31.21■■■□□ 2.59
VEGFA-226ENST00000611736 SMIM22K7EJ46 135 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 PDHXO00330 501 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 GNAT2P19087 354 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 NOM1Q5C9Z4 860 aaKnown RBP31.2■■■□□ 2.59
VEGFA-226ENST00000611736 C12orf60Q5U649 245 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 FASTKD5Q7L8L6 764 aaKnown RBP31.2■■■□□ 2.59
VEGFA-226ENST00000611736 AS3MTQ9HBK9 375 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 GINM1Q9NU53 330 aa31.2■■■□□ 2.59
VEGFA-226ENST00000611736 FKTNO75072 461 aa31.19■■■□□ 2.58
VEGFA-226ENST00000611736 APPP05067 770 aa31.19■■■□□ 2.58
VEGFA-226ENST00000611736 GPAT2Q6NUI2 795 aa31.19■■■□□ 2.58
VEGFA-226ENST00000611736 CTR9Q6PD62 1173 aa31.19■■■□□ 2.58
VEGFA-226ENST00000611736 CCDC129Q6ZRS4 1044 aa31.19■■■□□ 2.58
VEGFA-226ENST00000611736 ABCB5Q2M3G0 1257 aa31.18■■■□□ 2.58
VEGFA-226ENST00000611736 EPB41L4AQ9HCS5 686 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-226ENST00000611736 MYH8P13535 1937 aa31.18■■■□□ 2.58
VEGFA-226ENST00000611736 GIMAP6Q6P9H5 292 aa31.17■■■□□ 2.58
VEGFA-226ENST00000611736 WDR18Q9BV38 432 aa31.17■■■□□ 2.58
VEGFA-226ENST00000611736 ARPP21Q9UBL0 812 aaPredicted RBP31.17■■■□□ 2.58
VEGFA-226ENST00000611736 SWAP70Q9UH65 585 aa31.17■■■□□ 2.58
VEGFA-226ENST00000611736 TDO2P48775 406 aa31.16■■■□□ 2.58
VEGFA-226ENST00000611736 HMGCS2P54868 508 aa31.16■■■□□ 2.58
VEGFA-226ENST00000611736 RAB3GAP1Q15042 981 aa31.16■■■□□ 2.58
VEGFA-226ENST00000611736 CABP5Q9NP86 173 aa31.16■■■□□ 2.58
VEGFA-226ENST00000611736 PATL2C9JE40 543 aaKnown RBP31.15■■■□□ 2.58
VEGFA-226ENST00000611736 DGKZQ13574 1117 aa31.15■■■□□ 2.58
VEGFA-226ENST00000611736 MTMR2Q13614 643 aa31.15■■■□□ 2.58
VEGFA-226ENST00000611736 ABHD8Q96I13 439 aa31.15■■■□□ 2.58
VEGFA-226ENST00000611736 FAM227BQ96M60 508 aa31.15■■■□□ 2.58
VEGFA-226ENST00000611736 MINDY4BA8MYZ0 360 aa31.14■■■□□ 2.58
VEGFA-226ENST00000611736 MPHOSPH10O00566 681 aaKnown RBP31.14■■■□□ 2.58
VEGFA-226ENST00000611736 A0A0D9SFI3 127 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 CDK8P49336 464 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 BACE1P56817 501 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 SBK1Q52WX2 424 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 C16orf86Q6ZW13 317 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 IFNL3Q8IZI9 196 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 NACAP1Q9BZK3 213 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 HELLSQ9NRZ9 838 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 TAOK2Q9UL54 1235 aa31.13■■■□□ 2.57
VEGFA-226ENST00000611736 LOC285556D6RIA3 1793 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 TLR2O60603 784 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 NMIQ13287 307 aaPredicted RBP31.12■■■□□ 2.57
VEGFA-226ENST00000611736 TREML2Q5T2D2 321 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 CTU1Q7Z7A3 348 aaKnown RBP31.12■■■□□ 2.57
VEGFA-226ENST00000611736 TICAM2Q86XR7 235 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 STK11IPQ8N1F8 1099 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 PROCA1Q8NCQ7 364 aaPredicted RBP31.12■■■□□ 2.57
VEGFA-226ENST00000611736 PARK7Q99497 189 aaKnown RBP31.12■■■□□ 2.57
VEGFA-226ENST00000611736 AGTPBP1Q9UPW5 1226 aa31.12■■■□□ 2.57
VEGFA-226ENST00000611736 USP17L10C9JJH3 530 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 CYP2C8P10632 490 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 GUCY1A2P33402 732 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 SP3Q02447 781 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 SEPT2Q15019 361 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 MCOLN1Q9GZU1 580 aa31.11■■■□□ 2.57
VEGFA-226ENST00000611736 SDSP20132 328 aa31.1■■■□□ 2.57
VEGFA-226ENST00000611736 SH3D19Q5HYK7 790 aa31.1■■■□□ 2.57
VEGFA-226ENST00000611736 CD99L2Q8TCZ2 262 aa31.1■■■□□ 2.57
VEGFA-226ENST00000611736 FEZ1Q99689 392 aa31.1■■■□□ 2.57
VEGFA-226ENST00000611736 TMOD4Q9NZQ9 345 aa31.1■■■□□ 2.57
VEGFA-226ENST00000611736 AKR1B1P15121 316 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 MCMDC2Q4G0Z9 681 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 TTC22Q5TAA0 569 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 NAPBQ9H115 298 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 CPA4Q9UI42 421 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 SLC45A1Q9Y2W3 748 aa31.09■■■□□ 2.57
VEGFA-226ENST00000611736 VPS53Q5VIR6 699 aa31.08■■■□□ 2.57
VEGFA-226ENST00000611736 ACER1Q8TDN7 264 aa31.08■■■□□ 2.57
VEGFA-226ENST00000611736 ERO1AQ96HE7 468 aa31.08■■■□□ 2.57
VEGFA-226ENST00000611736 ADGRA2Q96PE1 1338 aa31.07■■■□□ 2.56
VEGFA-226ENST00000611736 C19orf81C9J6K1 198 aa31.07■■■□□ 2.56
VEGFA-226ENST00000611736 FOXP2O15409 715 aa31.07■■■□□ 2.56
VEGFA-226ENST00000611736 NEFLP07196 543 aa31.07■■■□□ 2.56
VEGFA-226ENST00000611736 GSPT1P15170 499 aaKnown RBP31.07■■■□□ 2.56
VEGFA-226ENST00000611736 ZYXQ15942 572 aaKnown RBP31.07■■■□□ 2.56
VEGFA-226ENST00000611736 TMEM179Q6ZVK1 233 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms