RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 NFXL1Q6ZNB6 911 aa25.67■■□□□ 1.7
USF2-216ENST00000607959 IQCA1Q86XH1 822 aa25.67■■□□□ 1.7
USF2-216ENST00000607959 NID2Q14112 1375 aa25.66■■□□□ 1.7
USF2-216ENST00000607959 ATRNL1Q5VV63 1379 aa25.66■■□□□ 1.7
USF2-216ENST00000607959 CDC27P30260 824 aa25.66■■□□□ 1.7
USF2-216ENST00000607959 TNPO1Q92973 898 aaKnown RBP25.66■■□□□ 1.7
USF2-216ENST00000607959 LLPHQ9BRT6 129 aaKnown RBP25.66■■□□□ 1.7
USF2-216ENST00000607959 SERPINB13Q9UIV8 391 aa25.66■■□□□ 1.7
USF2-216ENST00000607959 ERICH2A1L162 156 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 CCDC69A6NI79 296 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 BRD1O95696 1058 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 SHMT1P34896 483 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 MICU3Q86XE3 530 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 EHD4Q9H223 541 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 SLC12A7Q9Y666 1083 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 COL2A1P02458 1487 aaPredicted RBP25.65■■□□□ 1.7
USF2-216ENST00000607959 MYH8P13535 1937 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 ZBTB43O43298 467 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 PPFIA3O75145 1194 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 SYT1P21579 422 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 NT5C2P49902 561 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 NUCB2P80303 420 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 MICALL2Q8IY33 904 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 ZNF444Q8N0Y2 327 aaPredicted RBP25.65■■□□□ 1.7
USF2-216ENST00000607959 TMTC2Q8N394 836 aa25.65■■□□□ 1.7
USF2-216ENST00000607959 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.65■■□□□ 1.7
USF2-216ENST00000607959 DHX36Q9H2U1 1008 aaKnown RBP25.65■■□□□ 1.7
USF2-216ENST00000607959 TCP10L2B9ZVM9 353 aa25.64■■□□□ 1.69
USF2-216ENST00000607959 ADD1P35611 737 aaKnown RBP25.64■■□□□ 1.69
USF2-216ENST00000607959 CCDC144CPQ8IYA2 1237 aa25.64■■□□□ 1.69
USF2-216ENST00000607959 ZNF654Q8IZM8 581 aa25.64■■□□□ 1.69
USF2-216ENST00000607959 TCP11L1Q9NUJ3 509 aa25.64■■□□□ 1.69
USF2-216ENST00000607959 PTPDC1A2A3K4 754 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 METAP2P50579 478 aaKnown RBP eCLIP25.63■■□□□ 1.691e-6■■■□□ 16.3
USF2-216ENST00000607959 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
USF2-216ENST00000607959 TSPY3P0CV98 308 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 TSPY8P0CW00 308 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 FDPSP14324 419 aaKnown RBP25.63■■□□□ 1.69
USF2-216ENST00000607959 IFIT1BQ5T764 474 aaKnown RBP25.63■■□□□ 1.69
USF2-216ENST00000607959 SAMD7Q7Z3H4 446 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 METTL16Q86W50 562 aaKnown RBP25.63■■□□□ 1.69
USF2-216ENST00000607959 NEDD1Q8NHV4 660 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 ANKS1AQ92625 1134 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 DDX11Q96FC9 970 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 ZNF287Q9HBT7 754 aa25.63■■□□□ 1.69
USF2-216ENST00000607959 FAM196BA6NMK8 535 aa25.62■■□□□ 1.69
USF2-216ENST00000607959 HLA-DOAP06340 250 aa25.62■■□□□ 1.69
USF2-216ENST00000607959 MMP14P50281 582 aa25.62■■□□□ 1.69
USF2-216ENST00000607959 NTRK3Q16288 839 aa25.62■■□□□ 1.69
USF2-216ENST00000607959 GREB1LQ9C091 1923 aaPredicted RBP25.62■■□□□ 1.69
USF2-216ENST00000607959 GOLGA8AA7E2F4 631 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 FKBP1CQ5VVH2 108 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 PI4KBQ9UBF8 816 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 SWAP70Q9UH65 585 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 PGAP2Q9UHJ9 254 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 AKR1B1P15121 316 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 TROAPQ12815 778 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 RBM26Q5T8P6 1007 aaKnown RBP25.61■■□□□ 1.69
USF2-216ENST00000607959 CDAN1Q8IWY9 1227 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 TMOD2Q9NZR1 351 aa25.61■■□□□ 1.69
USF2-216ENST00000607959 PLIN4Q96Q06 1357 aa25.6■■□□□ 1.69
USF2-216ENST00000607959 ASTN2O75129 1339 aaPredicted RBP25.6■■□□□ 1.69
USF2-216ENST00000607959 RCAN1P53805 252 aa25.6■■□□□ 1.69
USF2-216ENST00000607959 FOXD4L5Q5VV16 416 aaPredicted RBP25.6■■□□□ 1.69
USF2-216ENST00000607959 DGKHQ86XP1 1220 aa25.6■■□□□ 1.69
USF2-216ENST00000607959 ZSCAN29Q8IWY8 852 aaPredicted RBP25.6■■□□□ 1.69
USF2-216ENST00000607959 FAM151AQ8WW52 585 aa25.6■■□□□ 1.69
USF2-216ENST00000607959 FOXD4L4Q8WXT5 416 aaPredicted RBP25.6■■□□□ 1.69
USF2-216ENST00000607959 RNF181Q9P0P0 153 aa25.6■■□□□ 1.69
USF2-216ENST00000607959 STX6O43752 255 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 NOVP48745 357 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 NFKBIBQ15653 356 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 GPC2Q8N158 579 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 VEZTQ9HBM0 779 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 MTMR6Q9Y217 621 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 IGKV6D-41A0A0C4DH26 115 aa25.59■■□□□ 1.69
USF2-216ENST00000607959 TBC1D10BQ4KMP7 808 aaPredicted RBP25.59■■□□□ 1.69
USF2-216ENST00000607959 SHROOM1Q2M3G4 852 aaPredicted RBP25.58■■□□□ 1.69
USF2-216ENST00000607959 FANCBQ8NB91 859 aa25.58■■□□□ 1.69
USF2-216ENST00000607959 SCAF8Q9UPN6 1271 aaKnown RBP25.58■■□□□ 1.69
USF2-216ENST00000607959 C9orf131Q5VYM1 1079 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 LARP1BQ659C4 914 aaKnown RBP25.57■■□□□ 1.68
USF2-216ENST00000607959 SYNE3Q6ZMZ3 975 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 FOXP4Q8IVH2 680 aaPredicted RBP25.57■■□□□ 1.68
USF2-216ENST00000607959 NUP133Q8WUM0 1156 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 CEP95Q96GE4 821 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 TMEM39BQ9GZU3 492 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 GPRC5DQ9NZD1 345 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 DHX16O60231 1041 aaKnown RBP25.57■■□□□ 1.68
USF2-216ENST00000607959 HMGN5P82970 282 aaKnown RBP25.57■■□□□ 1.68
USF2-216ENST00000607959 RTN1Q16799 776 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 TATDN1Q6P1N9 297 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 FAM83AQ86UY5 434 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 CHAMP1Q96JM3 812 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 CSRNP1Q96S65 589 aa25.57■■□□□ 1.68
USF2-216ENST00000607959 RRP1BQ14684 758 aaKnown RBP25.56■■□□□ 1.68
USF2-216ENST00000607959 CLEC17AQ6ZS10 378 aa25.56■■□□□ 1.68
USF2-216ENST00000607959 CATIPQ7Z7H3 387 aa25.56■■□□□ 1.68
USF2-216ENST00000607959 TMEM47Q9BQJ4 181 aa25.56■■□□□ 1.68
USF2-216ENST00000607959 MYO1BO43795 1136 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms