RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 LMTK2Q8IWU2 1503 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 ZWINTO95229 277 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 KRT9P35527 623 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 USH1GQ495M9 461 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 PDCL2Q8N4E4 241 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 SGSM2O43147 1006 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 EPB41P11171 864 aaKnown RBP12.34□□□□□ -0.43
SHANK2-219ENST00000606715 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
SHANK2-219ENST00000606715 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 E7EVH7 732 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 PLCD1P51178 756 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 SPATA24Q86W54 205 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 KRT19P08727 400 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 NLRX1Q86UT6 975 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 FAM204AQ9H8W3 233 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 PFDN4Q9NQP4 134 aa12.34□□□□□ -0.43
SHANK2-219ENST00000606715 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHANK2-219ENST00000606715 RNF187Q5TA31 235 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-219ENST00000606715 GABPB2Q8TAK5 448 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-219ENST00000606715 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 XDHP47989 1333 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 CFBP00751 764 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 GNPTABQ3T906 1256 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 GTF2IP78347 998 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 GEN1Q17RS7 908 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 MAEAQ7L5Y9 396 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 COPRSQ9NQ92 184 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 B4E1Z4 1266 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 SLC27A2O14975 620 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 STK10O94804 968 aaKnown RBP12.33□□□□□ -0.44
SHANK2-219ENST00000606715 ABL1P00519 1130 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 SLC27A3Q5K4L6 730 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 ZNF532Q9HCE3 1301 aa12.33□□□□□ -0.44
SHANK2-219ENST00000606715 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.44
SHANK2-219ENST00000606715 PNMA6EA0A0J9YXQ4 647 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
SHANK2-219ENST00000606715 PRPF6O94906 941 aaKnown RBP12.32□□□□□ -0.44
SHANK2-219ENST00000606715 DPP9Q86TI2 863 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 PTPRMP28827 1452 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 ZAP70P43403 619 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 CTR9Q6PD62 1173 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
SHANK2-219ENST00000606715 PTGS1P23219 599 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 UBASH3AP57075 661 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 CCNA1P78396 465 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 KRT25Q7Z3Z0 450 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
SHANK2-219ENST00000606715 INF2Q27J81 1249 aa12.32□□□□□ -0.44
SHANK2-219ENST00000606715 TACC1O75410 805 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 CLEC4GQ6UXB4 293 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
SHANK2-219ENST00000606715 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 KCNQ3O43525 872 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 GMNNO75496 209 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 RXRAP19793 462 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 FBF1Q8TES7 1133 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 CACYBPQ9HB71 228 aaKnown RBP12.31□□□□□ -0.44
SHANK2-219ENST00000606715 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ALKQ9UM73 1620 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ADRA2BP18089 450 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 CUL4BQ13620 913 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ARHGEF16Q5VV41 709 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ARMC9Q7Z3E5 817 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 STK25O00506 426 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 PPP1R21Q6ZMI0 780 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
SHANK2-219ENST00000606715 LRFN2Q9ULH4 789 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms