RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	STAG1	Q8WVM7	1258 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EIF3C	Q99613	913 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	CRACR2A	Q9BSW2	395 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	RNF41	Q9H4P4	317 aa	Predicted RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	MAGEF1	Q9HAY2	307 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	NCOA5	Q9HCD5	579 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	RWDD2A	Q9UIY3	292 aa		13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	AFDN	P55196	1824 aa	Known RBP	13.29	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SHTN1	A0MZ66	631 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TMCO5B	A8MYB1	307 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236		H7C1D1	291 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	KRT86	O43790	486 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	KIF1C	O43896	1103 aa	Known RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TAT	P17735	454 aa	Predicted RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	EEF1G	P26641	437 aa	Known RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	AMPD2	Q01433	879 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	LMNB2	Q03252	620 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PNOC	Q13519	176 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PLCB4	Q15147	1175 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	LONRF3	Q496Y0	759 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	CCDC129	Q6ZRS4	1044 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TOGARAM2	Q6ZUX3	1019 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	C10orf67	Q8IYJ2	551 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DPF2	Q92785	391 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SMARCC1	Q92922	1105 aa	Predicted RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	LTV1	Q96GA3	475 aa	Predicted RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	TSKS	Q9UJT2	592 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	FBXO2	Q9UK22	296 aa	Predicted RBP	13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	SYNRG	Q9UMZ2	1314 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	DISP2	A7MBM2	1401 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	PXDN	Q92626	1479 aa		13.28	□□□□□ -0.28
U2AF1L4-221	ENST00000601236	GC	P02774	474 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CYLC1	P35663	651 aa	Predicted RBP	13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ARHGAP25	P42331	645 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NTRK3	Q16288	839 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FIGN	Q5HY92	759 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EPHA10	Q5JZY3	1008 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ZNF569	Q5MCW4	686 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MCTP2	Q6DN12	878 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TTLL5	Q6EMB2	1281 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EMB	Q6PCB8	327 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LMBR1L	Q6UX01	489 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TRAPPC11	Q7Z392	1133 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ANKLE2	Q86XL3	938 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LRRN4CL	Q8ND94	238 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FAM76A	Q8TAV0	307 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SEC62	Q99442	399 aa	Known RBP	13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RNF26	Q9BY78	433 aa	Predicted RBP	13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LRRC2	Q9BYS8	371 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ABCB6	Q9NP58	842 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TIAM2	Q8IVF5	1701 aa		13.27	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	KIF28P	B7ZC32	967 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236		H3BQF6	201 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FANCG	O15287	622 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ACTN4	O43707	911 aa	Known RBP	13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LRP6	O75581	1613 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GUCY1B3	Q02153	619 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CUL4B	Q13620	913 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MCM6	Q14566	821 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FOXR2	Q6PJQ5	311 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	APTX	Q7Z2E3	356 aa	Known RBP	13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CCDC50	Q8IVM0	306 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	OR8K1	Q8NGG5	319 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	P3H4	Q92791	437 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	OSBP2	Q969R2	916 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CCDC102A	Q96A19	550 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NEUROD6	Q96NK8	337 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FAM184B	Q9ULE4	1060 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SLC12A7	Q9Y666	1083 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SAR1B	Q9Y6B6	198 aa		13.26	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RTL9	Q8NET4	1388 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	KDM4F	A0A1W2PPD8	638 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ERICH2	A1L162	156 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TRIM75P	A6NK02	468 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GOLGA8A	A7E2F4	631 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ANXA1	P04083	346 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CALM1	P0DP23	149 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CALM2	P0DP24	149 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CALM3	P0DP25	149 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PHKG2	P15735	406 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ANTXR2	P58335	489 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SKOR1	P84550	965 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	STIM1	Q13586	685 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	COL9A3	Q14050	684 aa	Predicted RBP	13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CCDC57	Q2TAC2	916 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ARMC9	Q7Z3E5	817 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FAM114A1	Q8IWE2	563 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MMGT1	Q8N4V1	131 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	STRN4	Q9NRL3	753 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ABHD10	Q9NUJ1	306 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PKD1L3	Q7Z443	1732 aa		13.25	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	C5	P01031	1676 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ABCB11	O95342	1321 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CDHR2	Q9BYE9	1310 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236		A0A1W2PQJ5	194 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TMEM232	C9JQI7	657 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GPAA1	O43292	621 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RNF40	O75150	1001 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms