RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PRMT6Q96LA8 375 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 DHX36Q9H2U1 1008 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 MYH1P12882 1939 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 CCDC196A0A1B0GTZ2 297 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 TSPY3P0CV98 308 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 TSPY8P0CW00 308 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 GABPAQ06546 454 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 ILDR2Q71H61 639 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 CATIPQ7Z7H3 387 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 DGKHQ86XP1 1220 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 ANKS1AQ92625 1134 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
SHKBP1-224ENST00000600718 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 F13A1P00488 732 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 CALM1P0DP23 149 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 CALM2P0DP24 149 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 CALM3P0DP25 149 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 PTMSP20962 102 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 CDC27P30260 824 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 RASSF7Q02833 373 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 MTMR14Q8NCE2 650 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 TDRD3Q9H7E2 651 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 FAM217BQ9NTX9 383 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 FAM198AQ9UFP1 575 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 ATP6V1DQ9Y5K8 247 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 ARFGEF1Q9Y6D6 1849 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 SPDYE2BA6NHP3 402 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 SPDYE6P0CI01 402 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 RXRAP19793 462 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 SERPINB13Q9UIV8 391 aa20.61■□□□□ 0.89
SHKBP1-224ENST00000600718 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 ENTPD3O75355 529 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 FDPSP14324 419 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 RTN1Q16799 776 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 FANCBQ8NB91 859 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 EHD4Q9H223 541 aa20.6■□□□□ 0.89
SHKBP1-224ENST00000600718 NMT2O60551 498 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 DDAH1O94760 285 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 RPS12P25398 132 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 CACNB3P54284 484 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 CCDC144CPQ8IYA2 1237 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 TMOD2Q9NZR1 351 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 FZD9O00144 591 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 EIF6P56537 245 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 TCP10Q12799 353 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 NTRK3Q16288 839 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 RCSD1Q6JBY9 416 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 ZFPM1Q8IX07 1006 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 NUP133Q8WUM0 1156 aa20.59■□□□□ 0.89
SHKBP1-224ENST00000600718 H3BQV1 296 aa20.58■□□□□ 0.89
SHKBP1-224ENST00000600718 IFFO2Q5TF58 517 aa20.58■□□□□ 0.89
SHKBP1-224ENST00000600718 RGS22Q8NE09 1264 aa20.58■□□□□ 0.89
SHKBP1-224ENST00000600718 PI4KBQ9UBF8 816 aa20.58■□□□□ 0.89
SHKBP1-224ENST00000600718 IFNAR1P17181 557 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 PRELPP51888 382 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 TROAPQ12815 778 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 CDC37L1Q7L3B6 337 aa20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 RBM28Q9NW13 759 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 ZNF70Q9UC06 446 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-224ENST00000600718 SSRP1Q08945 709 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-224ENST00000600718 ZSCAN29Q8IWY8 852 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-224ENST00000600718 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-224ENST00000600718 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
SHKBP1-224ENST00000600718 DDTLA6NHG4 134 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 SPDYE2Q495Y8 402 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 FKBP1CQ5VVH2 108 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 ZBED3Q96IU2 234 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 SYT17Q9BSW7 474 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 ATRNL1Q5VV63 1379 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 FMNL1O95466 1100 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 SH3BP5LQ7L8J4 393 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 DPF2Q92785 391 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 MAP3K14Q99558 947 aa20.55■□□□□ 0.88
SHKBP1-224ENST00000600718 PLIN4Q96Q06 1357 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 MYO1BO43795 1136 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 SHMT1P34896 483 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 NOVP48745 357 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 TRIM22Q8IYM9 498 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 CRACR2BQ8N4Y2 399 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 C8orf76Q96K31 380 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 CCDC17Q96LX7 622 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 ZSCAN16Q9H4T2 348 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 LMNB1P20700 586 aa20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 METTL16Q86W50 562 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-224ENST00000600718 CTCFLQ8NI51 663 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms