RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 LAMB1P07942 1786 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 FOXP2O15409 715 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
SNRPA-208ENST00000600456 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
SNRPA-208ENST00000600456 CETPP11597 493 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 ALX1Q15699 326 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
SNRPA-208ENST00000600456 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
SNRPA-208ENST00000600456 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
SNRPA-208ENST00000600456 ZMYM6O95789 1325 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 CYP2D7A0A087X1C5 515 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 GDF11O95390 407 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
SNRPA-208ENST00000600456 CHMLP26374 656 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 EVX2Q03828 476 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 AS3MTQ9HBK9 375 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
SNRPA-208ENST00000600456 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 GH2P01242 217 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
SNRPA-208ENST00000600456 CDK8P49336 464 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 CCL15Q16663 113 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 VPS53Q5VIR6 699 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 IFNL1Q8IU54 200 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 ZNF280CQ8ND82 737 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 DYNLL2Q96FJ2 89 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
SNRPA-208ENST00000600456 BAZ2AQ9UIF9 1905 aaKnown RBP16.47■□□□□ 0.23
SNRPA-208ENST00000600456 JAG1P78504 1218 aa16.46■□□□□ 0.23
SNRPA-208ENST00000600456 PPARAQ07869 468 aa16.46■□□□□ 0.23
SNRPA-208ENST00000600456 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
SNRPA-208ENST00000600456 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
SNRPA-208ENST00000600456 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
SNRPA-208ENST00000600456 A0A0G2JLL6 359 aaPredicted RBP16.45■□□□□ 0.22
SNRPA-208ENST00000600456 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
SNRPA-208ENST00000600456 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
SNRPA-208ENST00000600456 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
SNRPA-208ENST00000600456 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
SNRPA-208ENST00000600456 CFHR5Q9BXR6 569 aa16.45■□□□□ 0.22
SNRPA-208ENST00000600456 ANAPC4Q9UJX5 808 aa16.45■□□□□ 0.22
SNRPA-208ENST00000600456 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 IGF2BP3O00425 579 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNRPA-208ENST00000600456 FOXN1O15353 648 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 FGAP02671 866 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
SNRPA-208ENST00000600456 PDE4BQ07343 736 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 SPP2Q13103 211 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
SNRPA-208ENST00000600456 PTPN18Q99952 460 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
SNRPA-208ENST00000600456 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.44■□□□□ 0.22
SNRPA-208ENST00000600456 ATAD5Q96QE3 1844 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
SNRPA-208ENST00000600456 SGSM2O43147 1006 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 TRPA1O75762 1119 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 AKR1B1P15121 316 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 MOGSQ13724 837 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
SNRPA-208ENST00000600456 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
SNRPA-208ENST00000600456 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 RASA1P20936 1047 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 BACE1P56817 501 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
SNRPA-208ENST00000600456 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
SNRPA-208ENST00000600456 PCNTO95613 3336 aa16.41■□□□□ 0.22
SNRPA-208ENST00000600456 PHIPQ8WWQ0 1821 aa16.41■□□□□ 0.22
SNRPA-208ENST00000600456 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
SNRPA-208ENST00000600456 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
SNRPA-208ENST00000600456 SEPT2Q15019 361 aa16.41■□□□□ 0.22
SNRPA-208ENST00000600456 NOM1Q5C9Z4 860 aaKnown RBP16.41■□□□□ 0.22
SNRPA-208ENST00000600456 ZNF444Q8N0Y2 327 aaPredicted RBP16.41■□□□□ 0.22
SNRPA-208ENST00000600456 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
SNRPA-208ENST00000600456 IL25Q9H293 177 aa16.41■□□□□ 0.22
SNRPA-208ENST00000600456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNRPA-208ENST00000600456 ORC4O43929 436 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 CDC45O75419 566 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 FGRP09769 529 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 NT5C2P49902 561 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 HMGCS2P54868 508 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 MTMR2Q13614 643 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms