RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
CCDC9-203ENST00000596938 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
CCDC9-203ENST00000596938 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
CCDC9-203ENST00000596938 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
CCDC9-203ENST00000596938 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 GDF11O95390 407 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 FMNL1O95466 1100 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 GH2P01242 217 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 OSBPP22059 807 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 HOXA7P31268 230 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 MTMR2Q13614 643 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 SLFNL1Q499Z3 407 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-203ENST00000596938 SDR42E1Q8WUS8 393 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 PTCH2Q9Y6C5 1203 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
CCDC9-203ENST00000596938 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 PRKAB2O43741 272 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 MBD4O95243 580 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 SHMT1P34896 483 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 FCGRTP55899 365 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 ZNF333Q96JL9 665 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
CCDC9-203ENST00000596938 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
CCDC9-203ENST00000596938 ERC2O15083 957 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 CHGBP05060 677 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
CCDC9-203ENST00000596938 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 PUS7LQ9H0K6 701 aaKnown RBP12.67□□□□□ -0.38
CCDC9-203ENST00000596938 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
CCDC9-203ENST00000596938 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
CCDC9-203ENST00000596938 GLRX3O76003 335 aaKnown RBP12.66□□□□□ -0.38
CCDC9-203ENST00000596938 USP14P54578 494 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 FAM110CQ1W6H9 321 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 LRRFIP1Q32MZ4 808 aaKnown RBP12.66□□□□□ -0.38
CCDC9-203ENST00000596938 C12orf60Q5U649 245 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
CCDC9-203ENST00000596938 P2RX7Q99572 595 aaKnown RBP12.66□□□□□ -0.38
CCDC9-203ENST00000596938 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
CCDC9-203ENST00000596938 USP17L12C9JPN9 530 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 USP17L21D6R901 530 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 CYP2D6P10635 497 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 IRX3P78415 501 aaPredicted RBP12.65□□□□□ -0.38
CCDC9-203ENST00000596938 EVX2Q03828 476 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 RAB3GAP1Q15042 981 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 RAET1EQ8TD07 263 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 APPBP2Q92624 585 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 OSBP2Q969R2 916 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 CCDC17Q96LX7 622 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
CCDC9-203ENST00000596938 DOCK1Q14185 1865 aa12.65□□□□□ -0.38
CCDC9-203ENST00000596938 MYPNQ86TC9 1320 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 TNRC18O15417 2968 aaPredicted RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 MYO5AQ9Y4I1 1855 aaKnown RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 TNPO2O14787 897 aaKnown RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 MX1P20591 662 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 GRK4P32298 578 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 PRKCZQ05513 592 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 IRF5Q13568 498 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 SEPT2Q15019 361 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 OTUD7AQ8TE49 926 aaPredicted RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
CCDC9-203ENST00000596938 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 STAP2Q9UGK3 403 aa12.64□□□□□ -0.39
CCDC9-203ENST00000596938 BRCA2P51587 3418 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 SIPA1L1O43166 1804 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L15C9J2P7 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L13C9JLJ4 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L11C9JVI0 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms