RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 UTYO14607 1347 aa11□□□□□ -0.65
AP3D1-208ENST00000590683 TRANK1O15050 2925 aa11□□□□□ -0.65
AP3D1-208ENST00000590683 ZNF318Q5VUA4 2279 aa11□□□□□ -0.65
AP3D1-208ENST00000590683 MAPK4P31152 587 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 CYP2C19P33261 490 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 ARRDC4Q8NCT1 418 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 USP40Q9NVE5 1235 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 SMCHD1A6NHR9 2005 aa10.99□□□□□ -0.65
AP3D1-208ENST00000590683 DDTLA6NHG4 134 aaPredicted RBP10.98□□□□□ -0.65
AP3D1-208ENST00000590683 RGS3P49796 1198 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 ERVK-24P63145 666 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 IRX3P78415 501 aaPredicted RBP10.98□□□□□ -0.65
AP3D1-208ENST00000590683 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 RASIP1Q5U651 963 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 C16orf59Q7L2K0 433 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 ZNF280CQ8ND82 737 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
AP3D1-208ENST00000590683 PUS3Q9BZE2 481 aaKnown RBP10.98□□□□□ -0.65
AP3D1-208ENST00000590683 RBPJLQ9UBG7 517 aa10.98□□□□□ -0.65
AP3D1-208ENST00000590683 YBX2Q9Y2T7 364 aaKnown RBP10.98□□□□□ -0.65
AP3D1-208ENST00000590683 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 PQBP1O60828 265 aaKnown RBP10.97□□□□□ -0.65
AP3D1-208ENST00000590683 CYBAP13498 195 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 HERVK_113P62684 666 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 FOXK2Q01167 660 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 TMEM240Q5SV17 173 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 G2E3Q7L622 706 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
AP3D1-208ENST00000590683 CCAR1Q8IX12 1150 aaKnown RBP10.97□□□□□ -0.65
AP3D1-208ENST00000590683 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 C8orf58Q8NAV2 365 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 TMEM39AQ9NV64 488 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 MSRAQ9UJ68 235 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
AP3D1-208ENST00000590683 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
AP3D1-208ENST00000590683 C5orf42Q9H799 3197 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 ST18O60284 1047 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 ATP2B2Q01814 1243 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 LRRC41Q15345 812 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 RAB30Q15771 203 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 CCDC57Q2TAC2 916 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 LMBR1LQ6UX01 489 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 NPLOC4Q8TAT6 608 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 SLC28A3Q9HAS3 691 aa10.96□□□□□ -0.65
AP3D1-208ENST00000590683 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 RFXAPO00287 272 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 ACRP10323 421 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 FAAP100Q0VG06 881 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 CSPP1Q1MSJ5 1256 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 SH3D19Q5HYK7 790 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 KRT40Q6A162 431 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 SLC44A5Q8NCS7 719 aa10.95□□□□□ -0.66
AP3D1-208ENST00000590683 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
AP3D1-208ENST00000590683 RFX7Q2KHR2 1363 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 ENTPD3O75355 529 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 RRP1BQ14684 758 aaKnown RBP10.94□□□□□ -0.66
AP3D1-208ENST00000590683 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 KCNH6Q9H252 994 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 DDX4Q9NQI0 724 aaKnown RBP10.94□□□□□ -0.66
AP3D1-208ENST00000590683 COG5Q9UP83 839 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 MTCH2Q9Y6C9 303 aa10.94□□□□□ -0.66
AP3D1-208ENST00000590683 TIMP1P01033 207 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 IGHA2P01877 340 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 ZNF853P0CG23 659 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 MYOGP15173 224 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 CSF2RAP15509 400 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 PRDX5P30044 214 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 HOXA7P31268 230 aaPredicted RBP10.93□□□□□ -0.66
AP3D1-208ENST00000590683 RABGGTBP53611 331 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 PICALMQ13492 652 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 MTMR2Q13614 643 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 IDI2Q9BXS1 227 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 DCHS1Q96JQ0 3298 aa10.93□□□□□ -0.66
AP3D1-208ENST00000590683 CLSPNQ9HAW4 1339 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 SEPT4O43236 478 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 PTPREP23469 700 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 PPIGQ13427 754 aaKnown RBP eCLIP10.92□□□□□ -0.666e-9■■■□□ 15.2
AP3D1-208ENST00000590683 PRAMEF19Q5SWL8 479 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 MFSD5Q6N075 450 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 HLA-CQ95604 372 aa10.92□□□□□ -0.66
AP3D1-208ENST00000590683 COL4A4P53420 1690 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms