RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
VAT1-204ENST00000587147 PTPRFP10586 1907 aa20.23■□□□□ 0.83
VAT1-204ENST00000587147 MYH8P13535 1937 aa20.22■□□□□ 0.83
VAT1-204ENST00000587147 HSPA8P11142 646 aaKnown RBP20.22■□□□□ 0.83
VAT1-204ENST00000587147 SHMT1P34896 483 aa20.22■□□□□ 0.83
VAT1-204ENST00000587147 CERKLQ49MI3 558 aaPredicted RBP20.22■□□□□ 0.83
VAT1-204ENST00000587147 FASTKD5Q7L8L6 764 aaKnown RBP20.22■□□□□ 0.83
VAT1-204ENST00000587147 BRI3BPQ8WY22 251 aa20.22■□□□□ 0.83
VAT1-204ENST00000587147 ZMYM6O95789 1325 aa20.22■□□□□ 0.83
VAT1-204ENST00000587147 A0A0G2JLL6 359 aaPredicted RBP20.21■□□□□ 0.83
VAT1-204ENST00000587147 TRPA1O75762 1119 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 SLURP2P0DP57 97 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 C16orf86Q6ZW13 317 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 PRRT2Q7Z6L0 340 aaPredicted RBP20.21■□□□□ 0.83
VAT1-204ENST00000587147 IFNL3Q8IZI9 196 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 ZNF280CQ8ND82 737 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 CCDC17Q96LX7 622 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 SEC62Q99442 399 aaKnown RBP20.21■□□□□ 0.83
VAT1-204ENST00000587147 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 ZBTB21Q9ULJ3 1066 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 SLC45A1Q9Y2W3 748 aa20.21■□□□□ 0.83
VAT1-204ENST00000587147 IGF2BP3O00425 579 aaKnown RBP eCLIP20.2■□□□□ 0.82
VAT1-204ENST00000587147 GSPT1P15170 499 aaKnown RBP20.2■□□□□ 0.82
VAT1-204ENST00000587147 TDO2P48775 406 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
VAT1-204ENST00000587147 ALX1Q15699 326 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 ANKRD23Q86SG2 305 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 PTPN18Q99952 460 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
VAT1-204ENST00000587147 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 DIAPH3Q9NSV4 1193 aa20.2■□□□□ 0.82
VAT1-204ENST00000587147 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
VAT1-204ENST00000587147 LOC285556D6RIA3 1793 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 A0A0D9SFI3 127 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 APPP05067 770 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
VAT1-204ENST00000587147 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 PROCA1Q8NCQ7 364 aaPredicted RBP20.19■□□□□ 0.82
VAT1-204ENST00000587147 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 NAPBQ9H115 298 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 CCDC171Q6TFL3 1326 aa20.19■□□□□ 0.82
VAT1-204ENST00000587147 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 CYP2D6P10635 497 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 SH3D19Q5HYK7 790 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 PPP4R2Q9NY27 417 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 RAD50Q92878 1312 aa20.18■□□□□ 0.82
VAT1-204ENST00000587147 GDF11O95390 407 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 GH2P01242 217 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
VAT1-204ENST00000587147 CDK8P49336 464 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 LBX1P52954 281 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 MOGSQ13724 837 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 TMEM179Q6ZVK1 233 aa20.17■□□□□ 0.82
VAT1-204ENST00000587147 BTBD19C9JJ37 291 aa20.16■□□□□ 0.82
VAT1-204ENST00000587147 BACE1P56817 501 aa20.16■□□□□ 0.82
VAT1-204ENST00000587147 SPP2Q13103 211 aa20.16■□□□□ 0.82
VAT1-204ENST00000587147 ANAPC4Q9UJX5 808 aa20.16■□□□□ 0.82
VAT1-204ENST00000587147 TRIM75PA6NK02 468 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 FOXP2O15409 715 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 NT5C2P49902 561 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 JAG1P78504 1218 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
VAT1-204ENST00000587147 BMP2KLQ5H9B9 411 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 RUFY2Q8WXA3 655 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 ZFYVE28Q9HCC9 887 aa20.15■□□□□ 0.82
VAT1-204ENST00000587147 CYP2D7A0A087X1C5 515 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 HSPD1P10809 573 aaKnown RBP20.14■□□□□ 0.81
VAT1-204ENST00000587147 USP14P54578 494 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 PDE4BQ07343 736 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 TAF1CQ15572 869 aaPredicted RBP20.14■□□□□ 0.81
VAT1-204ENST00000587147 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
VAT1-204ENST00000587147 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 AGTPBP1Q9UPW5 1226 aa20.14■□□□□ 0.81
VAT1-204ENST00000587147 GREB1LQ9C091 1923 aaPredicted RBP20.14■□□□□ 0.81
VAT1-204ENST00000587147 MINDY4BA8MYZ0 360 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 GPR25O00155 361 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 PCP11498 1178 aaKnown RBP20.13■□□□□ 0.81
VAT1-204ENST00000587147 PPARAQ07869 468 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 CRHR2Q13324 411 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 GPAT2Q6NUI2 795 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
VAT1-204ENST00000587147 SLC44A5Q8NCS7 719 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 C12orf42Q96LP6 360 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 PARK7Q99497 189 aaKnown RBP20.13■□□□□ 0.81
VAT1-204ENST00000587147 DSCC1Q9BVC3 393 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 KIAA1683Q9H0B3 1180 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 MKNK2Q9HBH9 465 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
VAT1-204ENST00000587147 PDHXO00330 501 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 TLR2O60603 784 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 TBC1D8O95759 1140 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 GUCY1A2P33402 732 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 EVX2Q03828 476 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 RAB3GAP1Q15042 981 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
VAT1-204ENST00000587147 USP17L2Q6R6M4 530 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms