RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 IL25Q9H293 177 aa25.6■■□□□ 1.69
RETREG3-204ENST00000586796 SWAP70Q9UH65 585 aa25.6■■□□□ 1.69
RETREG3-204ENST00000586796 THSD7BQ9C0I4 1608 aa25.59■■□□□ 1.69
RETREG3-204ENST00000586796 MPHOSPH10O00566 681 aaKnown RBP25.59■■□□□ 1.69
RETREG3-204ENST00000586796 GH2P01242 217 aa25.59■■□□□ 1.69
RETREG3-204ENST00000586796 SREBF2Q12772 1141 aa25.59■■□□□ 1.69
RETREG3-204ENST00000586796 ABCB5Q2M3G0 1257 aa25.59■■□□□ 1.69
RETREG3-204ENST00000586796 ASNSP08243 561 aa25.58■■□□□ 1.69
RETREG3-204ENST00000586796 HSPA1AP0DMV8 641 aaKnown RBP25.58■■□□□ 1.69
RETREG3-204ENST00000586796 HSPA1BP0DMV9 641 aaKnown RBP25.58■■□□□ 1.69
RETREG3-204ENST00000586796 GTF2A2P52657 109 aa25.58■■□□□ 1.69
RETREG3-204ENST00000586796 C16orf86Q6ZW13 317 aa25.58■■□□□ 1.69
RETREG3-204ENST00000586796 ZBTB21Q9ULJ3 1066 aa25.58■■□□□ 1.69
RETREG3-204ENST00000586796 DOCK1Q14185 1865 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 TRIM75PA6NK02 468 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 USP17L5A8MUK1 530 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 FGAP02671 866 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 PPARAQ07869 468 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 SNAPC2Q13487 334 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 REM2Q8IYK8 340 aaPredicted RBP25.57■■□□□ 1.68
RETREG3-204ENST00000586796 MS4A4AQ96JQ5 239 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 CABP5Q9NP86 173 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 WBP1LQ9NX94 342 aa25.57■■□□□ 1.68
RETREG3-204ENST00000586796 CCL15-CCL14A0A0B4J2E2 113 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 TM4SF4P48230 202 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 RAB3GAP1Q15042 981 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 ALX1Q15699 326 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 CCL15Q16663 113 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 MKNK2Q9HBH9 465 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 AFG3L2Q9Y4W6 797 aa25.56■■□□□ 1.68
RETREG3-204ENST00000586796 CTDSPL2Q05D32 466 aa25.55■■□□□ 1.68
RETREG3-204ENST00000586796 RAD50Q92878 1312 aa25.55■■□□□ 1.68
RETREG3-204ENST00000586796 PRDM1O75626 825 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 SLC3A2P08195 630 aaKnown RBP25.54■■□□□ 1.68
RETREG3-204ENST00000586796 CETPP11597 493 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 AKR1B1P15121 316 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 INHBEP58166 350 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 SPP2Q13103 211 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 BRI3BPQ8WY22 251 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 AS3MTQ9HBK9 375 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 GINM1Q9NU53 330 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 RNF186Q9NXI6 227 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 TSKSQ9UJT2 592 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 KCNH4Q9UQ05 1017 aa25.54■■□□□ 1.68
RETREG3-204ENST00000586796 ATAD5Q96QE3 1844 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 CXCL11O14625 94 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 TRPA1O75762 1119 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 HAND2P61296 217 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 IFNL1Q8IU54 200 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 ZNF280CQ8ND82 737 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 PTPN18Q99952 460 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 TAOK2Q9UL54 1235 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 ROBO3Q96MS0 1386 aa25.53■■□□□ 1.68
RETREG3-204ENST00000586796 TESPA1A2RU30 521 aaPredicted RBP25.52■■□□□ 1.68
RETREG3-204ENST00000586796 IGF2BP3O00425 579 aaKnown RBP eCLIP25.52■■□□□ 1.68
RETREG3-204ENST00000586796 SGSM2O43147 1006 aa25.52■■□□□ 1.68
RETREG3-204ENST00000586796 PDE4BQ07343 736 aa25.52■■□□□ 1.68
RETREG3-204ENST00000586796 SEPT2Q15019 361 aa25.52■■□□□ 1.68
RETREG3-204ENST00000586796 CCDC17Q96LX7 622 aa25.52■■□□□ 1.68
RETREG3-204ENST00000586796 DSCC1Q9BVC3 393 aa25.52■■□□□ 1.68
RETREG3-204ENST00000586796 GADL1Q6ZQY3 521 aa25.51■■□□□ 1.67
RETREG3-204ENST00000586796 ZNF444Q8N0Y2 327 aaPredicted RBP25.51■■□□□ 1.67
RETREG3-204ENST00000586796 TBC1D2Q9BYX2 928 aa25.51■■□□□ 1.67
RETREG3-204ENST00000586796 ZNF287Q9HBT7 754 aa25.51■■□□□ 1.67
RETREG3-204ENST00000586796 INCENPQ9NQS7 918 aa25.51■■□□□ 1.67
RETREG3-204ENST00000586796 LAMB1P07942 1786 aa25.51■■□□□ 1.67
RETREG3-204ENST00000586796 FOXN1O15353 648 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 CDC45O75419 566 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 RASA1P20936 1047 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 GUCY1A2P33402 732 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 OTUD7BQ6GQQ9 843 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 CASC1Q6TDU7 716 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 TMEM179Q6ZVK1 233 aa25.5■■□□□ 1.67
RETREG3-204ENST00000586796 ZMYM6O95789 1325 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 A0A0G2JLL6 359 aaPredicted RBP25.49■■□□□ 1.67
RETREG3-204ENST00000586796 PTH1RQ03431 593 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 DGKZQ13574 1117 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 MTMR2Q13614 643 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 PRRT2Q7Z6L0 340 aaPredicted RBP25.49■■□□□ 1.67
RETREG3-204ENST00000586796 FAM43AQ8N2R8 423 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 ESYT1Q9BSJ8 1104 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 WDR18Q9BV38 432 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 TOMM22Q9NS69 142 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 ANAPC4Q9UJX5 808 aa25.49■■□□□ 1.67
RETREG3-204ENST00000586796 BTBD19C9JJ37 291 aa25.48■■□□□ 1.67
RETREG3-204ENST00000586796 ZNF213O14771 459 aa25.48■■□□□ 1.67
RETREG3-204ENST00000586796 HMGCS2P54868 508 aa25.48■■□□□ 1.67
RETREG3-204ENST00000586796 ZYXQ15942 572 aaKnown RBP25.48■■□□□ 1.67
RETREG3-204ENST00000586796 CLEC10AQ8IUN9 316 aa25.48■■□□□ 1.67
RETREG3-204ENST00000586796 FEZ1Q99689 392 aa25.48■■□□□ 1.67
RETREG3-204ENST00000586796 PHIPQ8WWQ0 1821 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 CA12O43570 354 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 TBC1D8O95759 1140 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 MOGSQ13724 837 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 FAM47AQ5JRC9 791 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 KIAA1211Q6ZU35 1233 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 FASTKD5Q7L8L6 764 aaKnown RBP25.47■■□□□ 1.67
RETREG3-204ENST00000586796 ACER1Q8TDN7 264 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 CTNNA3Q9UI47 895 aa25.47■■□□□ 1.67
RETREG3-204ENST00000586796 TACC3Q9Y6A5 838 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms