RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 PGRP06401 933 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 PDE4BQ07343 736 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 PAOXQ6QHF9 649 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 ZNF507Q8TCN5 953 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 TINF2Q9BSI4 451 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 LGR6Q9HBX8 967 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 SSU72Q9NP77 194 aaKnown RBP4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 PCOLCE2Q9UKZ9 415 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 GSC2O15499 205 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 HTR3BO95264 441 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 NFKBIBQ15653 356 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 NKG7Q16617 165 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 KCT2Q8NC54 265 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 CAPN10Q9HC96 672 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 C1GALT1Q9NS00 363 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 ADAM30Q9UKF2 790 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 PCDHB14Q9Y5E9 798 aa4.02□□□□□ -1.77
RPRD1A-204ENST00000585953 ATE1O95260 518 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 PLCG1P19174 1290 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 MCM4P33991 863 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 ZC3H6P61129 1189 aaKnown RBP4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 SLBPQ14493 270 aaKnown RBP eCLIP4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 TMEM201Q5SNT2 666 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 CDC37L1Q7L3B6 337 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 HID1Q8IV36 788 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 REXO1Q8N1G1 1221 aaKnown RBP4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 ACSF2Q96CM8 615 aaPredicted RBP4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 SPATA32Q96LK8 384 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 GINM1Q9NU53 330 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 TJP2Q9UDY2 1190 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 PRKAG2Q9UGJ0 569 aa4.01□□□□□ -1.77
RPRD1A-204ENST00000585953 CAP2P40123 477 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 ZNF165P49910 485 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 CLCQ05315 142 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 CDK5R2Q13319 367 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 RNF43Q68DV7 783 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 GK5Q6ZS86 529 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 MRPL41Q8IXM3 137 aaKnown RBP4□□□□□ -1.77
RPRD1A-204ENST00000585953 GATA6Q92908 595 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 EHMT1Q9H9B1 1298 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 EFR3BQ9Y2G0 817 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 DNAJA2O60884 412 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 SOX9P48436 509 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 NFIAQ12857 509 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 COL9A2Q14055 689 aaPredicted RBP4□□□□□ -1.77
RPRD1A-204ENST00000585953 ARMCX6Q7L4S7 300 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 TMEM87BQ96K49 555 aa4□□□□□ -1.77
RPRD1A-204ENST00000585953 LRIG2O94898 1065 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 ADMP35318 185 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 GNL2Q13823 731 aaKnown RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 PRAMEF13Q5VWM6 474 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 INTS5Q6P9B9 1019 aaKnown RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 ZAR1Q86SH2 424 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 MCATQ8IVS2 390 aaKnown RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 SHISA5Q8N114 240 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 MFSD14AQ96MC6 490 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 TBC1D32Q96NH3 1257 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 C8orf37Q96NL8 207 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 DPH2Q9BQC3 489 aaPredicted RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 DBNDD2Q9BQY9 259 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 ZNRF3Q9ULT6 936 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 PPT2Q9UMR5 302 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 CST3P01034 146 aaPredicted RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 IGLV1-40P01703 118 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 ATF4P18848 351 aaPredicted RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 NASPP49321 788 aaPredicted RBP3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 NAALADL2Q58DX5 795 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 SLC6A19Q695T7 634 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 SEC16BQ96JE7 1060 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 KLHL3Q9UH77 587 aa3.99□□□□□ -1.77
RPRD1A-204ENST00000585953 MED26O95402 600 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 MLECQ14165 292 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 CCDC81Q6ZN84 652 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 FBXL6Q8N531 539 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 SLC43A3Q8NBI5 491 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 FAM13CQ8NE31 585 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 FERD3LQ96RJ6 166 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 GMIPQ9P107 970 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 FAM170BA6NMN3 283 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 MEIS3P2A8K0S8 358 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 UPK3BL1B0FP48 263 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 CHURC1-FNTBB4DL54 471 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 UPK3BL2E5RIL1 263 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 F13BP05160 661 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 YARSP54577 528 aaKnown RBP3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 OVOS1Q6IE37 1185 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 SLFN12Q8IYM2 578 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 TOP6BLQ8N6T0 577 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 MFSD2AQ8NA29 543 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 TMEM40Q8WWA1 233 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 DUSP23Q9BVJ7 150 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 ANTXR1Q9H6X2 564 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 PRDM10Q9NQV6 1147 aa3.98□□□□□ -1.77
RPRD1A-204ENST00000585953 SLC22A31A6NKX4 558 aa3.97□□□□□ -1.77
RPRD1A-204ENST00000585953 LEFTY1O75610 366 aa3.97□□□□□ -1.77
RPRD1A-204ENST00000585953 FAM87AP0C7U9 286 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms