RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 SBK1Q52WX2 424 aa15.08■□□□□ 0
RETREG3-203ENST00000585894 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
RETREG3-203ENST00000585894 CDK8P49336 464 aa15.07■□□□□ 0
RETREG3-203ENST00000585894 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
RETREG3-203ENST00000585894 TSKSQ9UJT2 592 aa15.07■□□□□ 0
RETREG3-203ENST00000585894 ZBTB21Q9ULJ3 1066 aa15.07■□□□□ 0
RETREG3-203ENST00000585894 LAMA4Q16363 1823 aa15.07■□□□□ 0
RETREG3-203ENST00000585894 TRIM75PA6NK02 468 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 PRDM1O75626 825 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 FGAP02671 866 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 PPATQ06203 517 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 PPARAQ07869 468 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 PPIL2Q13356 520 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 CERKLQ49MI3 558 aaPredicted RBP15.06■□□□□ 0
RETREG3-203ENST00000585894 C16orf86Q6ZW13 317 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 INCENPQ9NQS7 918 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 TACC3Q9Y6A5 838 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 MPHOSPH10O00566 681 aaKnown RBP15.06■□□□□ 0
RETREG3-203ENST00000585894 HSPA1AP0DMV8 641 aaKnown RBP15.06■□□□□ 0
RETREG3-203ENST00000585894 HSPA1BP0DMV9 641 aaKnown RBP15.06■□□□□ 0
RETREG3-203ENST00000585894 AKR1B1P15121 316 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 HAND2P61296 217 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 DGKZQ13574 1117 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 ABCB5Q2M3G0 1257 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 BRI3BPQ8WY22 251 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 WBP1LQ9NX94 342 aa15.06■□□□□ 0
RETREG3-203ENST00000585894 CCL15-CCL14A0A0B4J2E2 113 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 IGF2BP3O00425 579 aaKnown RBP eCLIP15.05■□□□□ -0
RETREG3-203ENST00000585894 GUCY1A2P33402 732 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 CCL15Q16663 113 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 PTPN18Q99952 460 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 AFG3L2Q9Y4W6 797 aa15.05■□□□□ -0
RETREG3-203ENST00000585894 GREB1LQ9C091 1923 aaPredicted RBP15.04■□□□□ -0
RETREG3-203ENST00000585894 MANSC4A6NHS7 340 aaPredicted RBP15.04■□□□□ -0
RETREG3-203ENST00000585894 ASNSP08243 561 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 MFAP1P55081 439 aaKnown RBP15.04■□□□□ -0
RETREG3-203ENST00000585894 MAP2K1Q02750 393 aaPredicted RBP15.04■□□□□ -0
RETREG3-203ENST00000585894 PTH1RQ03431 593 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 SPP2Q13103 211 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 SEPT2Q15019 361 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 ALX1Q15699 326 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 SWAP70Q9UH65 585 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 KCNH4Q9UQ05 1017 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 RAD50Q92878 1312 aa15.04■□□□□ -0
RETREG3-203ENST00000585894 USP17L5A8MUK1 530 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 SGSM2O43147 1006 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 RASA1P20936 1047 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 GTF2A2P52657 109 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 SNAPC2Q13487 334 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 RUFY2Q8WXA3 655 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 NBPF3Q9H094 633 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 FOXN1O15353 648 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 TRPA1O75762 1119 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 TM4SF4P48230 202 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 SREBF2Q12772 1141 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 MOGSQ13724 837 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 IFNL1Q8IU54 200 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 FAM43AQ8N2R8 423 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 ESYT1Q9BSJ8 1104 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 MKNK2Q9HBH9 465 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 RNF186Q9NXI6 227 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 LOC285556D6RIA3 1793 aa15.03■□□□□ -0
RETREG3-203ENST00000585894 MTMR2Q13614 643 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 ZYXQ15942 572 aaKnown RBP15.02□□□□□ -0.01
RETREG3-203ENST00000585894 TBC1D10CQ8IV04 446 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 ZNF280CQ8ND82 737 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 NKX2-3Q8TAU0 364 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 ACER1Q8TDN7 264 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 CABP5Q9NP86 173 aa15.02□□□□□ -0.01
RETREG3-203ENST00000585894 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 TESPA1A2RU30 521 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-203ENST00000585894 CDC45O75419 566 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 CETPP11597 493 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 HMGCS2P54868 508 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 BEGAINQ9BUH8 593 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 DSCC1Q9BVC3 393 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
RETREG3-203ENST00000585894 R3HDMLQ9H3Y0 253 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
RETREG3-203ENST00000585894 MYH4Q9Y623 1939 aa15.01□□□□□ -0.01
RETREG3-203ENST00000585894 A0A0G2JLL6 359 aaPredicted RBP15□□□□□ -0.01
RETREG3-203ENST00000585894 BTBD19C9JJ37 291 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 CXCL11O14625 94 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 TBC1D8O95759 1140 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 PRRT2Q7Z6L0 340 aaPredicted RBP15□□□□□ -0.01
RETREG3-203ENST00000585894 AS3MTQ9HBK9 375 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 ANAPC4Q9UJX5 808 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 A0A1W2PRG0 241 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
RETREG3-203ENST00000585894 TREML2Q5T2D2 321 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 WDR18Q9BV38 432 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 TOMM22Q9NS69 142 aa15□□□□□ -0.01
RETREG3-203ENST00000585894 TAF6LQ9Y6J9 622 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms