RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 JAG1P78504 1218 aa15.89■□□□□ 0.13
ERBB2-220ENST00000584684 GABPAQ06546 454 aa15.89■□□□□ 0.13
ERBB2-220ENST00000584684 HDAC1Q13547 482 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-220ENST00000584684 DCP1AQ9NPI6 582 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-220ENST00000584684 PNMA3Q9UL41 463 aa15.89■□□□□ 0.13
ERBB2-220ENST00000584684 MBD4O95243 580 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 HMGCS2P54868 508 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 BACE1P56817 501 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
ERBB2-220ENST00000584684 TREML2Q5T2D2 321 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 KBTBD3Q8NAB2 608 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 MYH8P13535 1937 aa15.88■□□□□ 0.13
ERBB2-220ENST00000584684 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
ERBB2-220ENST00000584684 BRCA2P51587 3418 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 GDF11O95390 407 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SHMT1P34896 483 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 PLCD1P51178 756 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SOX10P56693 466 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-220ENST00000584684 MTMR2Q13614 643 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SMCR8Q8TEV9 937 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SDR42E1Q8WUS8 393 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 ARMT1Q9H993 441 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 MCM9Q9NXL9 1143 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
ERBB2-220ENST00000584684 ERC2O15083 957 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 GH2P01242 217 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 POLR3DP05423 398 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-220ENST00000584684 CTGFP29279 349 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 FAM110CQ1W6H9 321 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 PI4K2BQ8TCG2 481 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 GCC1Q96CN9 775 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 PTCH2Q9Y6C5 1203 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 PDE4DIPQ5VU43 2346 aa15.86■□□□□ 0.13
ERBB2-220ENST00000584684 KIAA0100Q14667 2235 aaKnown RBP15.86■□□□□ 0.13
ERBB2-220ENST00000584684 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 GLRX3O76003 335 aaKnown RBP15.85■□□□□ 0.13
ERBB2-220ENST00000584684 ZFYP08048 801 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-220ENST00000584684 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-220ENST00000584684 PSMC4P43686 418 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 GCLCP48506 637 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-220ENST00000584684 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 CERKLQ49MI3 558 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-220ENST00000584684 TSHZ3Q63HK5 1081 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 ZNF333Q96JL9 665 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 C12orf42Q96LP6 360 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 TMOD4Q9NZQ9 345 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 SRRDQ9UH36 339 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
ERBB2-220ENST00000584684 CHGBP05060 677 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 MX1P20591 662 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 HOXD10P28358 340 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 FCGRTP55899 365 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 LRRFIP1Q32MZ4 808 aaKnown RBP15.84■□□□□ 0.13
ERBB2-220ENST00000584684 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 APPBP2Q92624 585 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 KIAA1683Q9H0B3 1180 aa15.84■□□□□ 0.13
ERBB2-220ENST00000584684 PUS7LQ9H0K6 701 aaKnown RBP15.84■□□□□ 0.13
ERBB2-220ENST00000584684 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-220ENST00000584684 PRKAB2O43741 272 aa15.83■□□□□ 0.12
ERBB2-220ENST00000584684 OSBPP22059 807 aa15.83■□□□□ 0.12
ERBB2-220ENST00000584684 NBPF11Q86T75 865 aa15.83■□□□□ 0.12
ERBB2-220ENST00000584684 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.12
ERBB2-220ENST00000584684 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
ERBB2-220ENST00000584684 RNF113AO15541 343 aaKnown RBP15.82■□□□□ 0.12
ERBB2-220ENST00000584684 FMNL1O95466 1100 aaPredicted RBP15.82■□□□□ 0.12
ERBB2-220ENST00000584684 USP14P54578 494 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 EVX2Q03828 476 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 C12orf60Q5U649 245 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 GIMAP6Q6P9H5 292 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 AMOTL1Q8IY63 956 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 STRBPQ96SI9 672 aaKnown RBP15.82■□□□□ 0.12
ERBB2-220ENST00000584684 CABP5Q9NP86 173 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 ARPP21Q9UBL0 812 aaPredicted RBP15.82■□□□□ 0.12
ERBB2-220ENST00000584684 MORF4L1Q9UBU8 362 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 MYPNQ86TC9 1320 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
ERBB2-220ENST00000584684 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
ERBB2-220ENST00000584684 CYP2D6P10635 497 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 GUCY1A2P33402 732 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-220ENST00000584684 TMEM179Q6ZVK1 233 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 C16orf86Q6ZW13 317 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 GTF3C2Q8WUA4 911 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-220ENST00000584684 OSBP2Q969R2 916 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 FEZ1Q99689 392 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-220ENST00000584684 STAP2Q9UGK3 403 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 SLC4A4Q9Y6R1 1079 aa15.81■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L12C9JPN9 530 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms