RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 KCNQ4P56696 695 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 NR5A1Q13285 461 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 TMC6Q7Z403 805 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
CSNK1D-222ENST00000584377 ERICH4A6NGS2 130 aa15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 PAXBP1Q9Y5B6 917 aa15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 PPP2R5BQ15173 497 aa15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 ZSCAN10Q96SZ4 725 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-222ENST00000584377 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 PTPREP23469 700 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 FANCCQ00597 558 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 MYL5Q02045 173 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 RNF26Q9BY78 433 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 PCDHA5Q9Y5H7 936 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 GRIN1Q05586 938 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 HSD3B7Q9H2F3 369 aa15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-222ENST00000584377 PRDM1O75626 825 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 ATP2B1P20020 1258 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 PTPN14Q15678 1187 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 TBC1D9BQ66K14 1250 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 ZNF384Q8TF68 577 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 ZNF592Q92610 1267 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 COL5A3P25940 1745 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 XBP1P17861 261 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 SFPQP23246 707 aaKnown RBP eCLIP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CCAR2Q8N163 923 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CABP5Q9NP86 173 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CEP131Q9UPN4 1083 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 FOXN1O15353 648 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 ARMCX5Q6P1M9 558 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 NYAP1Q6ZVC0 841 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 ELOA2Q8IYF1 753 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 TAF1P21675 1872 aa15.14■□□□□ 0.01
CSNK1D-222ENST00000584377 KLRK1P26718 216 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 SEMA3EO15041 775 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 POLR2DO15514 142 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 SERPINC1P01008 464 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 MDM2Q00987 491 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 DHX8Q14562 1220 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 VPS54Q9P1Q0 977 aa15.13■□□□□ 0.01
CSNK1D-222ENST00000584377 CNTNAP4Q9C0A0 1308 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 PCP11498 1178 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 UBASH3AP57075 661 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 POSTNQ15063 836 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 KCND1Q9NSA2 647 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 USP17L12C9JPN9 530 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 USP17L21D6R901 530 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 PKN1Q16512 942 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 NLRP3Q96P20 1036 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 NYXQ9GZU5 481 aa15.12■□□□□ 0.01
CSNK1D-222ENST00000584377 hCG_1642624A0A1W2PR95 340 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 NRDCO43847 1150 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 FGRP09769 529 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 BMP6P22004 513 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 MECOMQ03112 1051 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 FUT2Q10981 343 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 RBM28Q9NW13 759 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 RGL2O15211 777 aa15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 PRPF3O43395 683 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-222ENST00000584377 PLEKHA8P1O95397 391 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms