RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 PTPRFP10586 1907 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 SEMA3EO15041 775 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 XRCC5P13010 732 aaKnown RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 HMGCS2P54868 508 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 CACNB2Q08289 660 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 PICALMQ13492 652 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 ZNF710Q8N1W2 664 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 ZGPATQ8N5A5 531 aaKnown RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 SOCS4Q8WXH5 440 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 OSBPL5Q9H0X9 879 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 DDX4Q9NQI0 724 aaKnown RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 SALL2Q9Y467 1007 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-205ENST00000582331 GAKO14976 1311 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 DOCK1Q14185 1865 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
CCDC47-205ENST00000582331 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 ZKSCAN1P17029 563 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-205ENST00000582331 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
CCDC47-205ENST00000582331 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 GPRC5AQ8NFJ5 357 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 MAFAQ8NHW3 353 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-205ENST00000582331 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
CCDC47-205ENST00000582331 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
CCDC47-205ENST00000582331 COL2A1P02458 1487 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 VCANP13611 3396 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 CAP2P40123 477 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 BTDP43251 543 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 PHKA1P46020 1223 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 RFX5P48382 616 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 EMP3P54852 163 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 IRX3P78415 501 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 PDE3AQ14432 1141 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 CCDC184Q52MB2 194 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 SPTY2D1Q68D10 685 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 ATG9AQ7Z3C6 839 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 CCAR1Q8IX12 1150 aaKnown RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 SENP6Q9GZR1 1112 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-205ENST00000582331 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 AS3MTQ9HBK9 375 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 PRKAG2Q9UGJ0 569 aa9.47□□□□□ -0.89
CCDC47-205ENST00000582331 MAPK4P31152 587 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 HOXA7P31268 230 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-205ENST00000582331 RGS2P41220 211 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 USP6NLQ92738 828 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 USP44Q9H0E7 712 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 TMOD4Q9NZQ9 345 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 PLXNB2O15031 1838 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 PRUNE2Q8WUY3 3088 aa9.46□□□□□ -0.9
CCDC47-205ENST00000582331 LOC285556D6RIA3 1793 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 PEX10O60683 326 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 CIAO1O76071 339 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-205ENST00000582331 RHBDL3P58872 404 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 HERVK_113P62684 666 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 RRP1BQ14684 758 aaKnown RBP9.45□□□□□ -0.9
CCDC47-205ENST00000582331 SHHQ15465 462 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 CCL14Q16627 93 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 MORN1Q5T089 497 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 WDR18Q9BV38 432 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 SIL1Q9H173 461 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 TXNRD2Q9NNW7 524 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 RBPJLQ9UBG7 517 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 MROH7-TTC4A0A0A0MT08 1334 aa9.45□□□□□ -0.9
CCDC47-205ENST00000582331 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
CCDC47-205ENST00000582331 LDHCP07864 332 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-205ENST00000582331 COL9A1P20849 921 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 BACE1P56817 501 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 ERVK-9P63128 1117 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 ERVK-24P63145 666 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 MTMR2Q13614 643 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 Q3C1V9 767 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 MFSD14CQ5VZR4 134 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 GPR142Q7Z601 462 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 PLEKHH3Q7Z736 793 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 EDC3Q96F86 508 aaKnown RBP9.44□□□□□ -0.9
CCDC47-205ENST00000582331 APBA2Q99767 749 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms