RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 BACE1P56817 501 aa27.1■■□□□ 1.93
CASC3-207ENST00000581849 TATDN1Q6P1N9 297 aa27.1■■□□□ 1.93
CASC3-207ENST00000581849 RAET1EQ8TD07 263 aa27.1■■□□□ 1.93
CASC3-207ENST00000581849 DNAJC2Q99543 621 aaKnown RBP27.1■■□□□ 1.93
CASC3-207ENST00000581849 SH3TC2Q8TF17 1288 aa27.09■■□□□ 1.93
CASC3-207ENST00000581849 LRRCC1Q9C099 1032 aa27.09■■□□□ 1.93
CASC3-207ENST00000581849 GRK4P32298 578 aa27.08■■□□□ 1.93
CASC3-207ENST00000581849 JAG1P78504 1218 aa27.08■■□□□ 1.93
CASC3-207ENST00000581849 CRNKL1Q9BZJ0 848 aaKnown RBP27.08■■□□□ 1.93
CASC3-207ENST00000581849 TMOD4Q9NZQ9 345 aa27.08■■□□□ 1.93
CASC3-207ENST00000581849 NAV1Q8NEY1 1877 aa27.08■■□□□ 1.93
CASC3-207ENST00000581849 TCRBV5S4A2TA0A5A2 114 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 HOXA7P31268 230 aaPredicted RBP27.07■■□□□ 1.92
CASC3-207ENST00000581849 PRKCZQ05513 592 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 MTMR2Q13614 643 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 SLC4A8Q2Y0W8 1093 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 HAUS7Q99871 368 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 PAG1Q9NWQ8 432 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 TAOK2Q9UL54 1235 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 ZNF532Q9HCE3 1301 aa27.07■■□□□ 1.92
CASC3-207ENST00000581849 USP17L10C9JJH3 530 aa27.06■■□□□ 1.92
CASC3-207ENST00000581849 GDF11O95390 407 aa27.06■■□□□ 1.92
CASC3-207ENST00000581849 EN2P19622 333 aaPredicted RBP27.06■■□□□ 1.92
CASC3-207ENST00000581849 ANKRD13CQ8N6S4 541 aa27.06■■□□□ 1.92
CASC3-207ENST00000581849 SLAIN1Q8ND83 568 aa27.06■■□□□ 1.92
CASC3-207ENST00000581849 ASCC2Q9H1I8 757 aaPredicted RBP27.06■■□□□ 1.92
CASC3-207ENST00000581849 TNPO2O14787 897 aaKnown RBP27.05■■□□□ 1.92
CASC3-207ENST00000581849 ECM2O94769 699 aaPredicted RBP27.05■■□□□ 1.92
CASC3-207ENST00000581849 IRF5Q13568 498 aa27.05■■□□□ 1.92
CASC3-207ENST00000581849 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.05■■□□□ 1.924e-7■□□□□ 8.7
CASC3-207ENST00000581849 BOLA2Q9H3K6 86 aa27.04■■□□□ 1.92
CASC3-207ENST00000581849 BRCA2P51587 3418 aa27.03■■□□□ 1.92
CASC3-207ENST00000581849 ADD2P35612 726 aa27.03■■□□□ 1.92
CASC3-207ENST00000581849 PXYLP1Q8TE99 480 aa27.03■■□□□ 1.92
CASC3-207ENST00000581849 MORF4L1Q9UBU8 362 aa27.03■■□□□ 1.92
CASC3-207ENST00000581849 MYH7P12883 1935 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 GH2P01242 217 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 POLR3DP05423 398 aaPredicted RBP27.02■■□□□ 1.92
CASC3-207ENST00000581849 FLT3LGP49771 235 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 UBXN2AP68543 259 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 IRX3P78415 501 aaPredicted RBP27.02■■□□□ 1.92
CASC3-207ENST00000581849 COA7Q96BR5 231 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 EDC3Q96F86 508 aaKnown RBP27.02■■□□□ 1.92
CASC3-207ENST00000581849 DCTPP1Q9H773 170 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 GABRQQ9UN88 632 aa27.02■■□□□ 1.92
CASC3-207ENST00000581849 PLCD1P51178 756 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 GABPAQ06546 454 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 UBE3CQ15386 1083 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 SHROOM1Q2M3G4 852 aaPredicted RBP27.01■■□□□ 1.91
CASC3-207ENST00000581849 CERKLQ49MI3 558 aaPredicted RBP27.01■■□□□ 1.91
CASC3-207ENST00000581849 USP17L2Q6R6M4 530 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 NKX2-3Q8TAU0 364 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 GTF3C2Q8WUA4 911 aaPredicted RBP27.01■■□□□ 1.91
CASC3-207ENST00000581849 C12orf42Q96LP6 360 aa27.01■■□□□ 1.91
CASC3-207ENST00000581849 SHMT1P34896 483 aa27■■□□□ 1.91
CASC3-207ENST00000581849 ABCB5Q2M3G0 1257 aa27■■□□□ 1.91
CASC3-207ENST00000581849 LCORLQ8N3X6 602 aa27■■□□□ 1.91
CASC3-207ENST00000581849 CABP5Q9NP86 173 aa27■■□□□ 1.91
CASC3-207ENST00000581849 DCP1AQ9NPI6 582 aaPredicted RBP27■■□□□ 1.91
CASC3-207ENST00000581849 MCM9Q9NXL9 1143 aa27■■□□□ 1.91
CASC3-207ENST00000581849 MKI67P46013 3256 aaKnown RBP27■■□□□ 1.91
CASC3-207ENST00000581849 DOCK3Q8IZD9 2030 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 ADCY3O60266 1144 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 USP14P54578 494 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 MTFR1Q15390 333 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 ZSCAN25Q6NSZ9 544 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 BCL11AQ9H165 835 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 ATP8A2Q9NTI2 1148 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 ECHDC1Q9NTX5 307 aa26.99■■□□□ 1.91
CASC3-207ENST00000581849 GJB1P08034 283 aa26.98■■□□□ 1.91
CASC3-207ENST00000581849 CAPN2P17655 700 aa26.98■■□□□ 1.91
CASC3-207ENST00000581849 HERVK_113P62684 666 aa26.98■■□□□ 1.91
CASC3-207ENST00000581849 KIAA1683Q9H0B3 1180 aa26.98■■□□□ 1.91
CASC3-207ENST00000581849 EMILIN3Q9NT22 766 aa26.98■■□□□ 1.91
CASC3-207ENST00000581849 MYCP01106 439 aaPredicted RBP26.97■■□□□ 1.91
CASC3-207ENST00000581849 SDR42E1Q8WUS8 393 aa26.97■■□□□ 1.91
CASC3-207ENST00000581849 FEZ1Q99689 392 aa26.97■■□□□ 1.91
CASC3-207ENST00000581849 ARMT1Q9H993 441 aa26.97■■□□□ 1.91
CASC3-207ENST00000581849 BIN2Q9UBW5 565 aaPredicted RBP26.97■■□□□ 1.91
CASC3-207ENST00000581849 SWAP70Q9UH65 585 aa26.97■■□□□ 1.91
CASC3-207ENST00000581849 SMARCA5O60264 1052 aaPredicted RBP26.96■■□□□ 1.91
CASC3-207ENST00000581849 MBD4O95243 580 aa26.96■■□□□ 1.91
CASC3-207ENST00000581849 CCL5P13501 91 aa26.96■■□□□ 1.91
CASC3-207ENST00000581849 GJA8P48165 433 aa26.96■■□□□ 1.91
CASC3-207ENST00000581849 GPATCH3Q96I76 525 aa26.96■■□□□ 1.91
CASC3-207ENST00000581849 P2RX7Q99572 595 aaKnown RBP26.96■■□□□ 1.91
CASC3-207ENST00000581849 RAB3GAP1Q15042 981 aa26.95■■□□□ 1.9
CASC3-207ENST00000581849 GPRC5AQ8NFJ5 357 aa26.94■■□□□ 1.9
CASC3-207ENST00000581849 RNF208Q9H0X6 261 aa26.94■■□□□ 1.9
CASC3-207ENST00000581849 USP17L15C9J2P7 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L13C9JLJ4 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L11C9JVI0 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L18D6R9N7 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L22D6RA61 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L17D6RBQ6 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L19D6RCP7 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L20D6RJB6 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 USP17L24Q0WX57 530 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 SHISA4Q96DD7 197 aa26.93■■□□□ 1.9
CASC3-207ENST00000581849 DDRGK1Q96HY6 314 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms