RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 GNAT2P19087 354 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 SDSP20132 328 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
GGA3-209ENST00000580646 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
GGA3-209ENST00000580646 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 A0A0G2JLL6 359 aaPredicted RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 GPAA1O43292 621 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 CAP2P40123 477 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 USP5P45974 858 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 CAP1Q01518 475 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 ARHGEF6Q15052 776 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 GIMAP6Q6P9H5 292 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 C17orf99Q6UX52 265 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 FASTKD5Q7L8L6 764 aaKnown RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 PRRT2Q7Z6L0 340 aaPredicted RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 LCORLQ8N3X6 602 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 STRBPQ96SI9 672 aaKnown RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
GGA3-209ENST00000580646 PALD1Q9ULE6 856 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 RAD50Q92878 1312 aa11.85□□□□□ -0.51
GGA3-209ENST00000580646 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 CHGBP05060 677 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
GGA3-209ENST00000580646 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
GGA3-209ENST00000580646 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 DCP1AQ9NPI6 582 aaPredicted RBP11.84□□□□□ -0.51
GGA3-209ENST00000580646 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
GGA3-209ENST00000580646 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
GGA3-209ENST00000580646 M0R2C6 588 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 KIF22Q14807 665 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 GADL1Q6ZQY3 521 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 CRACR2BQ8N4Y2 399 aaPredicted RBP11.83□□□□□ -0.52
GGA3-209ENST00000580646 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 PARK7Q99497 189 aaKnown RBP11.83□□□□□ -0.52
GGA3-209ENST00000580646 EHD4Q9H223 541 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
GGA3-209ENST00000580646 PHIPQ8WWQ0 1821 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
GGA3-209ENST00000580646 CYP2C8P10632 490 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
GGA3-209ENST00000580646 SPP2Q13103 211 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
GGA3-209ENST00000580646 TTC6Q86TZ1 520 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 ZNF280CQ8ND82 737 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 FAM227BQ96M60 508 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
GGA3-209ENST00000580646 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 ARHGAP39Q9C0H5 1083 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 DNAJC18Q9H819 358 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 CCDC171Q6TFL3 1326 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
GGA3-209ENST00000580646 GSG1L2A8MUP6 293 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 ASNSP08243 561 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 CHMLP26374 656 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 JAG1P78504 1218 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 SLC4A8Q2Y0W8 1093 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 SBK1Q52WX2 424 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 NACAP1Q9BZK3 213 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
GGA3-209ENST00000580646 ARPP21Q9UBL0 812 aaPredicted RBP11.81□□□□□ -0.52
GGA3-209ENST00000580646 ROBO3Q96MS0 1386 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 PTPRFP10586 1907 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 PRKAB2O43741 272 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
GGA3-209ENST00000580646 GNRH1P01148 92 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 BCRP11274 1271 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 PSMC4P43686 418 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 ALX1Q15699 326 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
GGA3-209ENST00000580646 SKAP1Q86WV1 359 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
GGA3-209ENST00000580646 ARMC5Q96C12 935 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 WDR18Q9BV38 432 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 AGTPBP1Q9UPW5 1226 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
GGA3-209ENST00000580646 GREB1LQ9C091 1923 aaPredicted RBP11.8□□□□□ -0.52
GGA3-209ENST00000580646 FOXP2O15409 715 aa11.79□□□□□ -0.52
GGA3-209ENST00000580646 GDF11O95390 407 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms